Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2597

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
3,054,120	+		Pf6N2E2_2596	0.34	+0.4
3,054,120	+		Pf6N2E2_2596	0.34	+0.4
3,054,120	+		Pf6N2E2_2596	0.34	+0.0
3,054,120	+		Pf6N2E2_2596	0.34	-2.0
3,054,121	-		Pf6N2E2_2596	0.34	-0.6
3,054,121	-		Pf6N2E2_2596	0.34	+0.4
3,054,121	-		Pf6N2E2_2596	0.34	+0.4
3,054,207	+		Pf6N2E2_2596	0.41	-0.2
3,054,208	-		Pf6N2E2_2596	0.41	+0.4
3,054,208	-		Pf6N2E2_2596	0.41	-0.6
3,054,319	+		Pf6N2E2_2596	0.51	-0.2
3,054,319	+		Pf6N2E2_2596	0.51	+0.6
3,054,319	+		Pf6N2E2_2596	0.51	-1.2
3,054,320	-		Pf6N2E2_2596	0.51	+0.4
3,054,320	-		Pf6N2E2_2596	0.51	+0.4
3,054,369	+		Pf6N2E2_2596	0.55	+0.4
3,054,450	+		Pf6N2E2_2596	0.62	-2.2
3,054,450	+		Pf6N2E2_2596	0.62	+0.4
3,054,451	-		Pf6N2E2_2596	0.62	+0.4
3,054,802	+				-0.6
3,054,802	+				-1.2
3,054,802	+				-0.6
3,054,803	-				+0.4
3,055,090	-				+1.2
3,055,090	-				+1.0
3,055,347	+		Pf6N2E2_2597	0.20	-0.6
3,055,611	+		Pf6N2E2_2597	0.38	-2.0
3,055,611	+		Pf6N2E2_2597	0.38	+1.8
3,055,611	+		Pf6N2E2_2597	0.38	+1.4
3,055,611	+		Pf6N2E2_2597	0.38	+0.4
3,055,611	+		Pf6N2E2_2597	0.38	+0.8
3,055,611	+		Pf6N2E2_2597	0.38	-1.2
3,055,612	-		Pf6N2E2_2597	0.38	+0.8
3,055,612	-		Pf6N2E2_2597	0.38	+1.0
3,055,612	-		Pf6N2E2_2597	0.38	-0.6
3,055,612	-		Pf6N2E2_2597	0.38	+1.8
3,055,612	-		Pf6N2E2_2597	0.38	+1.8
3,055,612	-		Pf6N2E2_2597	0.38	+1.2
3,055,612	-		Pf6N2E2_2597	0.38	+1.2
3,055,957	-		Pf6N2E2_2597	0.62	+1.2
3,056,013	-		Pf6N2E2_2597	0.66	+0.4
3,056,139	+		Pf6N2E2_2597	0.74	-0.6
3,056,139	+		Pf6N2E2_2597	0.74	+0.4
3,056,139	+		Pf6N2E2_2597	0.74	-1.2
3,056,140	-		Pf6N2E2_2597	0.74	+0.4
3,056,140	-		Pf6N2E2_2597	0.74	+0.4
3,056,140	-		Pf6N2E2_2597	0.74	-0.6
3,056,140	-		Pf6N2E2_2597	0.74	+0.9
3,056,191	-		Pf6N2E2_2597	0.78	+1.2
3,056,312	+		Pf6N2E2_2597	0.86	-0.6
3,056,343	-		Pf6N2E2_2597	0.88	+1.3
3,056,343	-		Pf6N2E2_2597	0.88	-0.6
3,056,343	-		Pf6N2E2_2597	0.88	+1.9
3,056,526	+				+1.4
3,056,526	+				+1.9
3,056,526	+				+0.4
3,056,527	-				+0.4
3,056,561	-				+0.4
3,056,573	-				+0.4
3,056,573	-				+0.4
3,056,573	-				+0.4
3,056,573	-				+0.4
3,056,573	-				+0.4
3,056,617	-				-1.2
3,056,625	-				+0.4
3,056,625	-				-0.6
3,056,627	+				+0.4
3,056,627	+				+1.1
3,056,627	+				+0.4
3,056,627	+				+0.4
3,056,628	-				+0.4
3,056,628	-				-2.2
3,056,628	-				+0.4
3,056,631	+				-0.6
3,056,632	-				+0.9
3,056,632	-				+1.6
3,056,632	-				+0.4
3,056,682	-				-0.6
3,056,708	-				-1.2
3,057,001	-				-2.0
3,057,001	-				+0.4
3,057,126	+		Pf6N2E2_2599	0.32	+0.4
3,057,126	+		Pf6N2E2_2599	0.32	+0.4
3,057,126	+		Pf6N2E2_2599	0.32	-0.6
3,057,126	+		Pf6N2E2_2599	0.32	-0.4
3,057,126	+		Pf6N2E2_2599	0.32	+0.4
3,057,126	+		Pf6N2E2_2599	0.32	-0.6
3,057,127	-		Pf6N2E2_2599	0.32	+0.4
3,057,127	-		Pf6N2E2_2599	0.32	-0.6
3,057,127	-		Pf6N2E2_2599	0.32	-0.2
3,057,127	-		Pf6N2E2_2599	0.32	+0.4
3,057,127	-		Pf6N2E2_2599	0.32	-1.2
3,057,133	-		Pf6N2E2_2599	0.34	-0.8
3,057,133	-		Pf6N2E2_2599	0.34	-0.3
3,057,133	-		Pf6N2E2_2599	0.34	-0.6
3,057,133	-		Pf6N2E2_2599	0.34	-0.6
3,057,227	+		Pf6N2E2_2599	0.58	-0.6
3,057,244	+		Pf6N2E2_2599	0.62	-0.1
3,057,247	-		Pf6N2E2_2599	0.63	-0.6
3,057,381	-				+1.2
3,057,399	+				-0.6
3,057,399	+				+0.4
3,057,399	+				-0.9
3,057,399	+				-0.4
3,057,399	+				-0.6
3,057,400	-				+0.2
3,057,400	-				-0.2
3,057,424	+				-0.1
3,057,424	+				-0.5
3,057,424	+				-0.2
3,057,424	+				+0.4
3,057,425	-				+0.4
3,057,427	-				-1.2
3,057,435	+				+0.8
3,057,459	+				-0.6
3,057,460	-				+0.2