Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2578

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
3,036,884	+		Pf6N2E2_2577	0.14	+0.4
3,036,888	-		Pf6N2E2_2577	0.15	+0.4
3,037,019	+		Pf6N2E2_2577	0.26	-0.4
3,037,020	-		Pf6N2E2_2577	0.26	-0.6
3,037,020	-		Pf6N2E2_2577	0.26	+0.9
3,037,037	+		Pf6N2E2_2577	0.28	-0.6
3,037,175	-		Pf6N2E2_2577	0.40	-0.6
3,037,214	+		Pf6N2E2_2577	0.43	+0.1
3,037,215	-		Pf6N2E2_2577	0.43	+0.4
3,037,215	-		Pf6N2E2_2577	0.43	+0.9
3,037,300	-		Pf6N2E2_2577	0.51	+0.4
3,037,437	+		Pf6N2E2_2577	0.63	-0.6
3,037,446	+		Pf6N2E2_2577	0.64	+0.9
3,037,446	+		Pf6N2E2_2577	0.64	+0.4
3,037,446	+		Pf6N2E2_2577	0.64	+0.4
3,037,446	+		Pf6N2E2_2577	0.64	-1.2
3,037,447	-		Pf6N2E2_2577	0.64	+1.4
3,037,530	+		Pf6N2E2_2577	0.71	+0.4
3,037,614	-		Pf6N2E2_2577	0.79	+0.4
3,037,614	-		Pf6N2E2_2577	0.79	-0.6
3,037,709	+		Pf6N2E2_2577	0.87	+0.4
3,037,709	+		Pf6N2E2_2577	0.87	+1.1
3,037,709	+		Pf6N2E2_2577	0.87	+0.4
3,037,709	+		Pf6N2E2_2577	0.87	+0.4
3,037,709	+		Pf6N2E2_2577	0.87	+1.4
3,037,709	+		Pf6N2E2_2577	0.87	+0.7
3,037,709	+		Pf6N2E2_2577	0.87	+0.4
3,037,710	-		Pf6N2E2_2577	0.87	-0.6
3,037,710	-		Pf6N2E2_2577	0.87	+1.0
3,037,710	-		Pf6N2E2_2577	0.87	+0.1
3,037,885	+				-1.2
3,037,886	-				-0.6
3,038,077	+		Pf6N2E2_2578	0.28	-1.2
3,038,286	+		Pf6N2E2_2578	0.54	+0.4
3,038,504	+		Pf6N2E2_2578	0.82	-1.2
3,038,607	+				+0.4
3,038,669	-				+0.4
3,038,669	-				-0.6
3,038,677	-		Pf6N2E2_2579	0.11	-0.6
3,038,677	-		Pf6N2E2_2579	0.11	+1.0
3,038,691	+		Pf6N2E2_2579	0.16	-0.6
3,038,691	+		Pf6N2E2_2579	0.16	+0.4
3,038,691	+		Pf6N2E2_2579	0.16	-2.5
3,038,691	+		Pf6N2E2_2579	0.16	+1.1
3,038,692	-		Pf6N2E2_2579	0.16	+1.0
3,038,692	-		Pf6N2E2_2579	0.16	+1.7
3,038,692	-		Pf6N2E2_2579	0.16	-0.6
3,038,692	-		Pf6N2E2_2579	0.16	-1.2
3,038,709	-		Pf6N2E2_2579	0.23	+1.7
3,038,861	+		Pf6N2E2_2579	0.79	+1.7
3,038,861	+		Pf6N2E2_2579	0.79	+0.4
3,038,862	-		Pf6N2E2_2579	0.79	-1.2
3,038,903	+				+0.4
3,038,903	+				+0.4
3,038,904	-				-0.6
3,038,917	+				+1.5
3,038,942	+				+0.4
3,038,943	-				+0.4
3,039,207	+		Pf6N2E2_2580	0.35	+0.4
3,039,335	+		Pf6N2E2_2580	0.53	+0.4
3,039,335	+		Pf6N2E2_2580	0.53	-0.6
3,039,336	-		Pf6N2E2_2580	0.53	+0.4
3,039,336	-		Pf6N2E2_2580	0.53	+0.4
3,039,569	+		Pf6N2E2_2580	0.84	+0.4
3,039,569	+		Pf6N2E2_2580	0.84	+0.4