Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2552

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
3,011,708	-				+1.4
3,011,709	+				+0.4
3,011,709	+				+0.4
3,011,710	-				-0.6
3,011,710	-				-0.6
3,011,710	-				-0.6
3,011,710	-				-0.6
3,011,776	-				+0.4
3,011,776	-				-0.6
3,011,818	+				+0.4
3,011,819	-				-0.6
3,011,819	-				-1.2
3,011,819	-				-0.1
3,011,819	-				-1.2
3,011,821	+				+0.4
3,011,822	-				+0.4
3,011,822	-				-0.4
3,011,984	+				-0.6
3,011,984	+				+0.6
3,011,984	+				+0.2
3,011,984	+				+0.4
3,011,984	+				-0.6
3,012,031	-				+0.4
3,012,031	-				-0.5
3,012,054	-				+0.4
3,012,122	-				-0.6
3,012,122	-				+0.4
3,012,176	+				+0.4
3,012,176	+				+0.4
3,012,177	-				-0.6
3,012,246	-				+0.4
3,012,246	-				-1.2
3,012,246	-				-0.6
3,012,347	+		Pf6N2E2_2551	0.25	-0.7
3,012,350	+		Pf6N2E2_2551	0.26	-1.6
3,012,350	+		Pf6N2E2_2551	0.26	-1.2
3,012,351	-		Pf6N2E2_2551	0.26	+0.4
3,012,351	-		Pf6N2E2_2551	0.26	-1.2
3,012,351	-		Pf6N2E2_2551	0.26	-0.3
3,012,351	-		Pf6N2E2_2551	0.26	+0.4
3,012,351	-		Pf6N2E2_2551	0.26	-1.2
3,012,395	+		Pf6N2E2_2551	0.37	-0.6
3,012,395	+		Pf6N2E2_2551	0.37	-1.2
3,012,395	+		Pf6N2E2_2551	0.37	+0.4
3,012,395	+		Pf6N2E2_2551	0.37	+0.4
3,012,395	+		Pf6N2E2_2551	0.37	+0.4
3,012,396	-		Pf6N2E2_2551	0.37	-0.6
3,012,396	-		Pf6N2E2_2551	0.37	+0.4
3,012,396	-		Pf6N2E2_2551	0.37	+0.4
3,012,396	-		Pf6N2E2_2551	0.37	+0.4
3,012,459	+		Pf6N2E2_2551	0.53	-1.0
3,012,459	+		Pf6N2E2_2551	0.53	-0.6
3,012,459	+		Pf6N2E2_2551	0.53	-1.2
3,012,633	+				-0.6
3,012,634	-				+0.1
3,012,634	-				-0.8
3,012,634	-				+0.4
3,012,668	-				-0.6
3,013,160	-		Pf6N2E2_2552	0.41	+0.4
3,013,257	-		Pf6N2E2_2552	0.49	-2.8
3,013,390	+		Pf6N2E2_2552	0.60	-2.3
3,013,390	+		Pf6N2E2_2552	0.60	-2.4
3,013,390	+		Pf6N2E2_2552	0.60	-2.1
3,013,390	+				-0.2
3,013,390	+		Pf6N2E2_2552	0.60	-2.0
3,013,391	-		Pf6N2E2_2552	0.60	-1.7
3,013,391	-		Pf6N2E2_2552	0.60	-1.5
3,013,391	-		Pf6N2E2_2552	0.60	+0.7
3,013,391	-		Pf6N2E2_2552	0.60	-1.7
3,013,391	-		Pf6N2E2_2552	0.60	-1.8
3,013,394	+		Pf6N2E2_2552	0.61	-1.6
3,013,408	+		Pf6N2E2_2552	0.62	-1.0
3,013,408	+		Pf6N2E2_2552	0.62	-1.3
3,013,409	-		Pf6N2E2_2552	0.62	-1.1
3,013,541	-		Pf6N2E2_2552	0.73	-5.6
3,013,541	-		Pf6N2E2_2552	0.73	-5.5
3,013,741	+		Pf6N2E2_2552	0.89	-5.3
3,013,742	-		Pf6N2E2_2552	0.89	-4.5
3,014,363	-				-5.5