Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2513

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,964,245	-		Pf6N2E2_2512	0.77	+0.4
2,964,391	-				-2.0
2,964,398	-				+0.4
2,964,654	+		Pf6N2E2_2513	0.10	+0.4
2,964,760	-		Pf6N2E2_2513	0.19	-0.6
2,964,831	+		Pf6N2E2_2513	0.24	-1.2
2,964,842	-		Pf6N2E2_2513	0.25	-0.6
2,964,869	-		Pf6N2E2_2513	0.27	-1.6
2,964,912	-		Pf6N2E2_2513	0.31	+0.4
2,964,996	-		Pf6N2E2_2513	0.37	-0.6
2,965,015	-		Pf6N2E2_2513	0.39	-0.6
2,965,196	-		Pf6N2E2_2513	0.53	+0.4
2,965,713	-				+0.4
2,965,862	-				+0.4
2,965,865	-				+0.4
2,965,865	-				+0.4
2,965,885	-				+0.4
2,965,885	-				+0.4
2,965,939	-				-0.6
2,965,944	-				+0.4
2,966,008	-				+0.4
2,966,057	-				+0.4
2,966,108	-		Pf6N2E2_2514	0.13	+0.4
2,966,305	-		Pf6N2E2_2514	0.32	+0.4
2,966,344	-		Pf6N2E2_2514	0.35	+0.4
2,966,381	-		Pf6N2E2_2514	0.39	+0.4
2,966,479	+		Pf6N2E2_2514	0.48	-0.6
2,966,480	-		Pf6N2E2_2514	0.48	+0.4
2,966,491	-		Pf6N2E2_2514	0.49	-0.6
2,966,528	+		Pf6N2E2_2514	0.53	+0.4
2,966,585	+		Pf6N2E2_2514	0.58	+0.4
2,966,586	-		Pf6N2E2_2514	0.58	+0.4
2,966,693	-		Pf6N2E2_2514	0.69	+0.4