Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2467

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,915,372	-				+0.4
2,915,372	-				+0.4
2,915,428	+				-0.2
2,915,450	+				-0.4
2,915,450	+				+0.4
2,915,450	+				+0.4
2,915,450	+				+0.4
2,915,450	+				-0.6
2,915,450	+				+0.1
2,915,451	-				+0.4
2,915,451	-				+0.4
2,915,451	-				-1.2
2,915,451	-				-0.6
2,915,451	-				-1.2
2,915,451	-				+0.4
2,915,451	-				+0.4
2,915,451	-				-1.6
2,915,454	+				-0.6
2,915,500	-				-1.2
2,915,500	-				+0.4
2,915,589	-				+0.4
2,915,605	-				-2.3
2,915,621	+		Pf6N2E2_2466	0.12	+0.4
2,915,622	-		Pf6N2E2_2466	0.12	+0.4
2,915,631	-		Pf6N2E2_2466	0.14	+0.4
2,915,690	+		Pf6N2E2_2466	0.26	-0.6
2,915,758	-		Pf6N2E2_2466	0.39	+0.4
2,915,758	-		Pf6N2E2_2466	0.39	-2.1
2,915,758	-		Pf6N2E2_2466	0.39	-0.6
2,915,905	-		Pf6N2E2_2466	0.69	+0.4
2,915,905	-		Pf6N2E2_2466	0.69	-0.6
2,915,946	-		Pf6N2E2_2466	0.77	+0.4
2,915,946	-		Pf6N2E2_2466	0.77	+0.4
2,915,946	-		Pf6N2E2_2466	0.77	-1.1
2,915,961	+		Pf6N2E2_2466	0.80	+0.4
2,915,961	+		Pf6N2E2_2466	0.80	+0.2
2,915,961	+		Pf6N2E2_2466	0.80	+0.4
2,915,961	+		Pf6N2E2_2466	0.80	-0.6
2,915,961	+		Pf6N2E2_2466	0.80	-0.7
2,915,962	-		Pf6N2E2_2466	0.80	-1.2
2,915,962	-		Pf6N2E2_2466	0.80	-0.6
2,915,962	-		Pf6N2E2_2466	0.80	+0.4
2,915,962	-		Pf6N2E2_2466	0.80	-0.6
2,915,962	-		Pf6N2E2_2466	0.80	-0.6
2,915,962	-		Pf6N2E2_2466	0.80	+0.4
2,915,962	-		Pf6N2E2_2466	0.80	-1.2
2,915,962	-		Pf6N2E2_2466	0.80	-1.3
2,915,962	-		Pf6N2E2_2466	0.80	-0.4
2,915,962	-				-2.0
2,915,962	-		Pf6N2E2_2466	0.80	+0.4
2,915,962	-		Pf6N2E2_2466	0.80	-0.6
2,915,962	-		Pf6N2E2_2466	0.80	+0.4
2,915,962	-		Pf6N2E2_2466	0.80	-1.6
2,915,962	-		Pf6N2E2_2466	0.80	-1.2
2,915,962	-		Pf6N2E2_2466	0.80	+0.4
2,916,012	+				+0.4
2,916,012	+				+0.4
2,916,013	-				+0.4
2,916,013	-				-1.6
2,916,013	-				+0.4
2,916,021	+				-2.6
2,916,021	+				+0.4
2,916,042	+				-0.4
2,916,042	+				-0.6
2,916,042	+				+0.4
2,916,043	-				-1.6
2,916,043	-				+0.4
2,916,104	+				+0.4
2,916,104	+				-0.6
2,916,104	+				-1.6
2,916,104	+				-0.6
2,916,104	+				+0.4
2,916,105	-				+0.4
2,916,105	-				+0.4
2,916,105	-				-0.6
2,916,328	+		Pf6N2E2_2467	0.19	-1.2
2,916,329	-		Pf6N2E2_2467	0.19	-0.6
2,916,398	-		Pf6N2E2_2467	0.26	-0.6
2,916,541	-		Pf6N2E2_2467	0.42	+0.4
2,916,726	+		Pf6N2E2_2467	0.63	+0.4
2,916,981	+				-0.7
2,916,981	+				+0.4
2,916,981	+				+0.4
2,916,981	+				-1.6
2,916,982	-				-0.6
2,916,982	-				+0.4
2,917,092	+				+0.4
2,917,092	+				-0.6
2,917,093	-				-0.6
2,917,093	-				-1.2
2,917,095	-				+0.4
2,917,095	-				-0.4
2,917,095	-				+0.4
2,917,121	+				-0.4
2,917,122	-				-0.6
2,917,122	-				+0.4
2,917,122	-				+0.4
2,917,122	-				-0.6
2,917,184	+		Pf6N2E2_2468	0.10	+0.4
2,917,185	-		Pf6N2E2_2468	0.11	+0.4
2,917,220	+		Pf6N2E2_2468	0.14	+0.4
2,917,221	-		Pf6N2E2_2468	0.14	+0.4
2,917,221	-				-0.6
2,917,229	+		Pf6N2E2_2468	0.15	+0.4
2,917,229	+		Pf6N2E2_2468	0.15	+0.4
2,917,229	+		Pf6N2E2_2468	0.15	+0.4
2,917,229	+		Pf6N2E2_2468	0.15	-0.6
2,917,230	-		Pf6N2E2_2468	0.15	+0.4
2,917,245	-		Pf6N2E2_2468	0.17	-1.1
2,917,277	+		Pf6N2E2_2468	0.20	+0.4
2,917,278	-		Pf6N2E2_2468	0.20	-0.0
2,917,300	-		Pf6N2E2_2468	0.23	-0.6
2,917,365	+		Pf6N2E2_2468	0.29	-0.0
2,917,392	+		Pf6N2E2_2468	0.32	-1.2
2,917,425	-		Pf6N2E2_2468	0.36	-1.2
2,917,425	-		Pf6N2E2_2468	0.36	-1.2
2,917,425	-		Pf6N2E2_2468	0.36	-1.9
2,918,056	-				-0.2