Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2447

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,897,195	+		Pf6N2E2_2446	0.45	-0.0
2,897,195	+		Pf6N2E2_2446	0.45	-1.0
2,897,196	-		Pf6N2E2_2446	0.45	+0.4
2,897,270	+		Pf6N2E2_2446	0.51	-0.6
2,897,271	-		Pf6N2E2_2446	0.52	+0.4
2,897,271	-		Pf6N2E2_2446	0.52	+0.4
2,897,271	-		Pf6N2E2_2446	0.52	-0.6
2,897,401	+		Pf6N2E2_2446	0.62	-1.2
2,897,401	+		Pf6N2E2_2446	0.62	+0.4
2,897,401	+		Pf6N2E2_2446	0.62	-0.6
2,897,401	+		Pf6N2E2_2446	0.62	+0.4
2,897,401	+		Pf6N2E2_2446	0.62	+0.4
2,897,432	+		Pf6N2E2_2446	0.65	+0.4
2,897,432	+		Pf6N2E2_2446	0.65	-1.2
2,897,433	-		Pf6N2E2_2446	0.65	-1.1
2,897,433	-		Pf6N2E2_2446	0.65	-0.6
2,897,433	-		Pf6N2E2_2446	0.65	-1.8
2,897,639	+		Pf6N2E2_2446	0.82	-0.2
2,897,639	+		Pf6N2E2_2446	0.82	+0.4
2,897,639	+		Pf6N2E2_2446	0.82	+0.4
2,897,639	+		Pf6N2E2_2446	0.82	+0.4
2,897,639	+		Pf6N2E2_2446	0.82	+0.4
2,897,856	-				-0.2
2,897,911	+				+0.4
2,897,911	+				+0.4
2,897,941	+				+0.4
2,897,941	+				+0.4
2,897,941	+				-0.6
2,897,942	-				-0.6
2,897,942	-				-0.7
2,897,942	-				+0.4
2,897,942	-				+0.4
2,897,942	-				-1.2
2,897,942	-				-0.1
2,897,942	-				-0.6
2,897,942	-				+0.4
2,897,942	-				+0.4
2,898,048	-				-1.2
2,898,048	-				+0.4
2,898,075	+				-0.6
2,898,075	+				-0.5
2,898,109	+				+0.4
2,898,109	+				-1.0
2,898,109	+				+0.4
2,898,109	+				+0.4
2,898,109	+				+0.4
2,898,109	+				-0.6
2,898,109	+				-0.6
2,898,109	+				-1.2
2,898,109	+				-0.6
2,898,110	-				-2.2
2,898,110	-				-1.6
2,898,110	-				-1.0
2,898,110	-				-0.6
2,898,110	-				-4.0
2,898,110	-				-1.6
2,898,110	-				-1.6
2,898,110	-				-1.5
2,898,110	-				+0.4
2,898,110	-				+0.4
2,898,110	-				-0.6
2,898,110	-				+0.4
2,898,110	-				+0.4
2,898,110	-				+0.4
2,898,110	-				-1.2
2,898,110	-				+0.4
2,898,110	-				+0.4
2,898,110	-				-2.2
2,898,110	-				-0.6
2,898,110	-				-2.5
2,898,110	-				+0.4
2,898,110	-				-0.6
2,898,110	-				+0.4
2,898,110	-				-1.2
2,898,111	+				+0.4
2,898,111	+				+0.4
2,898,111	+				-2.0
2,898,111	+				+0.4
2,898,111	+				-0.6
2,898,111	+				+0.4
2,898,111	+				+0.4
2,898,112	-				+0.4
2,898,112	-				-1.8
2,898,112	-				+0.4
2,898,112	-				-0.6
2,898,112	-				-0.6
2,898,112	-				-1.2
2,898,112	-				-1.6
2,898,112	-				+0.4
2,898,112	-				-2.2
2,898,112	-				-1.0
2,898,112	-				+0.4
2,898,112	-				+0.4
2,898,112	-				-1.6
2,898,113	+				-0.1
2,898,128	+				+0.4
2,898,129	-				+0.4
2,898,129	-				+0.4
2,898,129	-				+0.4
2,898,137	-				+0.4
2,898,189	+				-0.6
2,898,488	-		Pf6N2E2_2447	0.37	+0.4
2,898,751	+		Pf6N2E2_2447	0.67	-0.6
2,898,751	+		Pf6N2E2_2447	0.67	+0.4
2,898,751	+		Pf6N2E2_2447	0.67	-2.6
2,898,751	+		Pf6N2E2_2447	0.67	-2.0
2,898,752	-		Pf6N2E2_2447	0.67	+0.4
2,898,752	-		Pf6N2E2_2447	0.67	-2.6
2,898,752	-		Pf6N2E2_2447	0.67	+0.4
2,899,021	-				-2.2
2,899,133	-				+0.4
2,899,467	-				-0.4
2,899,467	-				+0.4
2,899,467	-				-1.2
2,899,632	-		Pf6N2E2_2448	0.28	+0.4
2,899,632	-		Pf6N2E2_2448	0.28	-1.2
2,899,632	-		Pf6N2E2_2448	0.28	+0.4
2,899,740	-		Pf6N2E2_2448	0.45	+0.4
2,899,740	-		Pf6N2E2_2448	0.45	+0.0
2,899,740	-		Pf6N2E2_2448	0.45	-0.8