Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2388

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,825,356	+				-0.6
2,825,356	+				+0.4
2,825,357	-				-1.6
2,825,419	-		Pf6N2E2_2387	0.11	+0.4
2,825,419	-		Pf6N2E2_2387	0.11	+0.4
2,825,419	-		Pf6N2E2_2387	0.11	+0.4
2,825,419	-		Pf6N2E2_2387	0.11	-1.2
2,825,424	+		Pf6N2E2_2387	0.12	+0.4
2,825,424	+		Pf6N2E2_2387	0.12	+0.4
2,825,424	+		Pf6N2E2_2387	0.12	-0.6
2,825,425	-		Pf6N2E2_2387	0.13	+0.4
2,825,425	-		Pf6N2E2_2387	0.13	-0.6
2,825,574	+		Pf6N2E2_2387	0.43	+0.4
2,825,844	+				+0.4
2,825,845	-				+0.4
2,825,930	-				-0.6
2,825,930	-				+0.4
2,826,447	+		Pf6N2E2_2388	0.47	-0.6
2,826,447	+		Pf6N2E2_2388	0.47	+0.4
2,826,447	+		Pf6N2E2_2388	0.47	+0.4
2,826,451	+		Pf6N2E2_2388	0.47	+0.4
2,826,452	-		Pf6N2E2_2388	0.48	-0.6
2,826,507	+		Pf6N2E2_2388	0.53	-0.6
2,826,726	+		Pf6N2E2_2388	0.75	-1.6
2,826,970	+				+0.4
2,826,970	+				-1.3
2,826,971	-				-0.2
2,827,016	+				+0.4
2,827,040	+				+0.4
2,827,040	+				+0.4
2,827,041	-				+0.4
2,827,069	-				-0.2
2,827,069	-				+0.4
2,827,069	-				-0.6
2,827,069	-				-0.6
2,827,112	-				-0.6
2,827,112	-				+0.4
2,827,189	-				+0.4
2,827,189	-				+0.4
2,827,189	-				+0.4
2,827,196	-				-1.0
2,827,196	-				-1.2
2,827,196	-				+0.4
2,827,196	-				-0.6
2,827,196	-				+0.4
2,827,196	-				-0.6
2,827,198	+				-0.6
2,827,199	-				-0.6
2,827,199	-				-0.6
2,827,199	-				-0.5
2,827,199	-				+0.4
2,827,368	+				+0.4
2,827,368	+				+0.4
2,827,645	+		Pf6N2E2_2389	0.18	+0.4
2,827,646	-		Pf6N2E2_2389	0.18	+0.4
2,827,770	+		Pf6N2E2_2389	0.23	-0.2
2,827,771	-		Pf6N2E2_2389	0.23	+0.4
2,827,822	-		Pf6N2E2_2389	0.25	-0.6
2,827,849	-		Pf6N2E2_2389	0.26	-0.7
2,827,849	-		Pf6N2E2_2389	0.26	-1.2