Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2320

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,743,020	+				-3.5
2,743,020	+				-3.5
2,743,020	+				-3.3
2,743,021	-				-3.9
2,743,021	-				+0.4
2,743,021	-				-2.8
2,743,021	-				-3.1
2,743,062	-				-3.3
2,743,334	+		Pf6N2E2_2319	0.53	-2.6
2,743,582	+		Pf6N2E2_2320	0.22	-1.9
2,743,582	+		Pf6N2E2_2320	0.22	-1.6
2,743,606	+		Pf6N2E2_2320	0.26	-1.6
2,743,607	-		Pf6N2E2_2320	0.26	-2.8
2,743,607	-		Pf6N2E2_2320	0.26	-3.1
2,743,717	+		Pf6N2E2_2320	0.42	-3.2
2,743,718	-		Pf6N2E2_2320	0.42	-2.9
2,744,194	+				-0.6
2,744,195	-				+0.4
2,744,296	+				-0.6
2,744,402	-		Pf6N2E2_2321	0.12	+1.0
2,744,412	-		Pf6N2E2_2321	0.13	+0.4
2,744,412	-		Pf6N2E2_2321	0.13	+1.0
2,744,434	+		Pf6N2E2_2321	0.15	+0.4
2,744,435	-		Pf6N2E2_2321	0.15	+0.4
2,744,438	-		Pf6N2E2_2321	0.15	-0.6
2,744,438	-		Pf6N2E2_2321	0.15	-0.4
2,744,438	-		Pf6N2E2_2321	0.15	+0.4
2,744,488	+		Pf6N2E2_2321	0.18	+0.4
2,744,669	-		Pf6N2E2_2321	0.32	+0.9
2,744,866	-		Pf6N2E2_2321	0.46	+0.4
2,744,968	+		Pf6N2E2_2321	0.53	+0.4
2,744,969	-		Pf6N2E2_2321	0.53	-0.6
2,744,969	-		Pf6N2E2_2321	0.53	+0.6
2,745,094	+		Pf6N2E2_2321	0.62	-0.6
2,745,095	-		Pf6N2E2_2321	0.62	+0.0
2,745,095	-		Pf6N2E2_2321	0.62	+0.6