Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2284

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,702,335	-		Pf6N2E2_2282	0.82	+0.3
2,702,499	+				+0.3
2,702,500	-				+0.3
2,702,500	-				+0.3
2,702,558	+				+0.3
2,702,559	-				+0.3
2,702,559	-				-0.6
2,702,559	-				-1.2
2,702,559	-				-0.2
2,702,563	-				+0.3
2,702,585	+				+1.1
2,702,586	-				-1.2
2,702,586	-				-0.7
2,702,586	-				-0.7
2,702,665	-				+0.3
2,702,665	-				+0.3
2,702,705	+				+0.3
2,702,710	+				-0.4
2,703,324	+				+0.3
2,703,465	-		Pf6N2E2_2284	0.30	-2.2
2,703,547	-		Pf6N2E2_2284	0.47	-1.2
2,703,547	-		Pf6N2E2_2284	0.47	+0.3
2,703,547	-		Pf6N2E2_2284	0.47	-0.7
2,703,784	-				+0.3
2,703,990	+		Pf6N2E2_2285	0.51	+0.3
2,703,991	-		Pf6N2E2_2285	0.52	-0.4
2,704,086	+				+0.3
2,704,097	+				+0.3
2,704,097	+				+0.3
2,704,098	-				+0.3
2,704,098	-				+0.3
2,704,103	+				-0.7
2,704,104	-				+0.3
2,704,104	-				-0.7
2,704,104	-				+0.3
2,704,104	-				-1.2
2,704,104	-				-2.1
2,704,134	+				-0.4
2,704,134	+				-0.7
2,704,134	+				-1.5
2,704,135	-				-0.7
2,704,135	-				+0.3
2,704,135	-				-0.1
2,704,135	-				-1.6
2,704,135	-				+0.3
2,704,135	-				+1.3
2,704,135	-				+0.3
2,704,135	-				-0.8
2,704,135	-				+0.3
2,704,135	-				+0.3
2,704,135	-				+0.3
2,704,136	+				+0.3
2,704,136	+				+0.3
2,704,136	+				-0.2
2,704,136	+				+0.3
2,704,136	+				+0.3
2,704,136	+				+0.3
2,704,136	+				-0.8
2,704,136	+				+0.3
2,704,137	-				-0.7
2,704,137	-				+0.3
2,704,137	-				+0.6
2,704,137	-				+0.3
2,704,137	-				-0.7
2,704,137	-				-1.7
2,704,137	-				+0.3
2,704,137	-				-1.2
2,704,137	-				+0.3
2,704,137	-				+1.3
2,704,137	-				+0.8
2,704,137	-				-0.7
2,704,137	-				-0.5
2,704,137	-				+0.9
2,704,138	+				-1.7
2,704,138	+				+0.3
2,704,138	+				-0.7
2,704,138	+				-0.7
2,704,139	-				-0.7
2,704,139	-				+0.3
2,704,192	-				+0.3
2,704,545	-		Pf6N2E2_2286	0.64	+0.3
2,704,586	+		Pf6N2E2_2286	0.72	+0.3
2,704,586	+		Pf6N2E2_2286	0.72	+0.3
2,704,587	-		Pf6N2E2_2286	0.72	-0.7
2,704,694	+				+0.3
2,704,718	+				-0.2
2,704,718	+				-0.3
2,704,718	+				-1.2
2,704,719	-				-0.1
2,704,719	-				-1.2
2,704,719	-				-0.7