Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2282

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,700,940	-		Pf6N2E2_2281	0.36	+0.3
2,700,940	-		Pf6N2E2_2281	0.36	+0.3
2,701,299	+		Pf6N2E2_2281	0.72	-0.6
2,701,585	+				-0.1
2,701,585	+				+0.3
2,701,585	+				+0.3
2,701,585	+				-0.6
2,701,585	+				+0.3
2,701,599	+				-1.1
2,701,600	-				-1.2
2,701,682	+				-0.8
2,701,683	-				+0.3
2,701,692	+				-1.2
2,701,718	+				-0.7
2,701,732	+				+0.3
2,701,732	+				+1.7
2,701,733	-				-0.1
2,701,733	-				+0.3
2,701,893	-		Pf6N2E2_2282	0.19	+0.3
2,701,893	-		Pf6N2E2_2282	0.19	+0.3
2,701,895	-		Pf6N2E2_2282	0.19	+0.3
2,701,895	-		Pf6N2E2_2282	0.19	-0.4
2,702,047	-		Pf6N2E2_2282	0.41	+0.3
2,702,083	-		Pf6N2E2_2282	0.46	+0.3
2,702,223	-		Pf6N2E2_2282	0.66	-0.7
2,702,223	-		Pf6N2E2_2282	0.66	-3.7
2,702,335	-		Pf6N2E2_2282	0.82	+0.3
2,702,499	+				+0.3
2,702,500	-				+0.3
2,702,500	-				+0.3
2,702,558	+				+0.3
2,702,559	-				+0.3
2,702,559	-				-0.6
2,702,559	-				-1.2
2,702,559	-				-0.2
2,702,563	-				+0.3
2,702,585	+				+1.1
2,702,586	-				-1.2
2,702,586	-				-0.7
2,702,586	-				-0.7
2,702,665	-				+0.3
2,702,665	-				+0.3
2,702,705	+				+0.3
2,702,710	+				-0.4
2,703,324	+				+0.3