Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2277

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,691,101	-		Pf6N2E2_2276	0.31	-0.7
2,691,101	-		Pf6N2E2_2276	0.31	-0.3
2,691,443	-		Pf6N2E2_2276	0.57	+0.3
2,691,457	+		Pf6N2E2_2276	0.58	-0.7
2,691,458	-		Pf6N2E2_2276	0.59	-0.3
2,691,588	+		Pf6N2E2_2276	0.69	-0.7
2,691,589	-		Pf6N2E2_2276	0.69	-1.3
2,691,721	+		Pf6N2E2_2276	0.79	-0.7
2,691,721	+		Pf6N2E2_2276	0.79	+0.3
2,691,721	+		Pf6N2E2_2276	0.79	+0.3
2,691,796	+		Pf6N2E2_2276	0.85	-0.7
2,691,797	-		Pf6N2E2_2276	0.85	+0.3
2,691,797	-		Pf6N2E2_2276	0.85	-0.7
2,691,828	+		Pf6N2E2_2276	0.87	+0.3
2,691,829	-		Pf6N2E2_2276	0.87	+0.3
2,691,829	-		Pf6N2E2_2276	0.87	+0.3
2,691,843	+		Pf6N2E2_2276	0.88	+0.3
2,691,843	+		Pf6N2E2_2276	0.88	-1.7
2,691,843	+		Pf6N2E2_2276	0.88	+0.3
2,691,843	+		Pf6N2E2_2276	0.88	-0.9
2,691,843	+		Pf6N2E2_2276	0.88	-0.7
2,691,843	+		Pf6N2E2_2276	0.88	+0.3
2,691,843	+		Pf6N2E2_2276	0.88	-2.3
2,691,847	+		Pf6N2E2_2276	0.88	+0.3
2,691,847	+		Pf6N2E2_2276	0.88	+0.3
2,691,847	+		Pf6N2E2_2276	0.88	-0.7
2,691,847	+		Pf6N2E2_2276	0.88	-0.6
2,691,847	+		Pf6N2E2_2276	0.88	+0.1
2,691,848	-		Pf6N2E2_2276	0.89	-0.7
2,691,848	-		Pf6N2E2_2276	0.89	-1.3
2,691,848	-		Pf6N2E2_2276	0.89	+0.3
2,691,848	-		Pf6N2E2_2276	0.89	+0.3
2,691,848	-		Pf6N2E2_2276	0.89	-0.0
2,691,848	-		Pf6N2E2_2276	0.89	-1.5
2,691,997	+				-0.7
2,691,997	+				-1.1
2,692,049	-				+0.3
2,692,049	-				+0.3
2,692,121	-				-0.7
2,692,191	-				+0.3
2,692,191	-				-3.0
2,692,343	+		Pf6N2E2_2277	0.18	-4.5
2,692,580	+		Pf6N2E2_2277	0.35	-3.7
2,692,865	+		Pf6N2E2_2277	0.55	-3.9
2,692,874	+		Pf6N2E2_2277	0.56	-3.1
2,692,874	+		Pf6N2E2_2277	0.56	-0.7
2,693,582	-				-1.3
2,693,582	-				+0.3
2,693,686	+				+0.3
2,693,769	+				-0.2
2,693,769	+				+0.3
2,693,769	+				-0.7
2,693,770	-				+0.3
2,693,770	-				+0.3
2,693,960	-				-1.3
2,693,960	-				+0.7
2,694,061	-				-0.5
2,694,061	-				-0.7
2,694,068	+				-0.2
2,694,069	-				-0.3
2,694,069	-				-0.2
2,694,196	+		Pf6N2E2_2278	0.14	-0.0
2,694,197	-		Pf6N2E2_2278	0.14	-0.4