Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2168

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,572,492	+		Pf6N2E2_2167	0.35	+0.3
2,572,628	+		Pf6N2E2_2167	0.45	-2.3
2,572,629	-		Pf6N2E2_2167	0.45	+0.6
2,572,646	+		Pf6N2E2_2167	0.47	-2.4
2,572,796	+		Pf6N2E2_2167	0.58	+0.3
2,572,797	-		Pf6N2E2_2167	0.59	+0.3
2,572,797	-		Pf6N2E2_2167	0.59	-0.3
2,572,797	-		Pf6N2E2_2167	0.59	+0.3
2,572,797	-		Pf6N2E2_2167	0.59	-0.7
2,572,976	+		Pf6N2E2_2167	0.73	+0.3
2,572,976	+		Pf6N2E2_2167	0.73	+0.3
2,572,976	+		Pf6N2E2_2167	0.73	+0.3
2,572,976	+		Pf6N2E2_2167	0.73	-0.7
2,572,976	+		Pf6N2E2_2167	0.73	-0.5
2,572,977	-		Pf6N2E2_2167	0.73	-1.3
2,572,977	-		Pf6N2E2_2167	0.73	+0.3
2,572,977	-		Pf6N2E2_2167	0.73	-0.4
2,572,977	-		Pf6N2E2_2167	0.73	+0.3
2,572,997	+		Pf6N2E2_2167	0.74	+0.3
2,572,998	-		Pf6N2E2_2167	0.74	-1.3
2,572,998	-		Pf6N2E2_2167	0.74	-0.7
2,573,168	-		Pf6N2E2_2167	0.88	+0.3
2,573,168	-		Pf6N2E2_2167	0.88	-0.7
2,573,168	-		Pf6N2E2_2167	0.88	-2.7
2,573,189	+		Pf6N2E2_2167	0.89	-0.1
2,573,197	+		Pf6N2E2_2167	0.90	-0.7
2,573,197	+		Pf6N2E2_2167	0.90	+0.5
2,573,197	+		Pf6N2E2_2167	0.90	+0.3
2,573,197	+		Pf6N2E2_2167	0.90	+0.3
2,573,198	-		Pf6N2E2_2167	0.90	+0.3
2,573,201	+				-1.3
2,573,201	+				-1.5
2,573,201	+				+0.0
2,573,201	+				-0.7
2,573,202	-				+0.3
2,573,202	-				+0.3
2,573,232	-				+0.3
2,573,232	-				+0.3
2,573,240	+				+0.3
2,573,359	+				+0.3
2,573,359	+				-1.1
2,573,359	+				+0.3
2,573,359	+				-1.7
2,573,359	+				+0.3
2,573,359	+				+0.3
2,573,360	-				-0.9
2,573,360	-				-0.2
2,573,360	-				-0.6
2,573,360	-				+0.3
2,573,360	-				+0.3
2,573,360	-				+0.3
2,573,360	-				+0.3
2,573,360	-				-0.7
2,573,360	-				-0.7
2,573,361	+				-0.7
2,573,361	+				-0.7
2,573,361	+				-0.6
2,573,361	+				-1.3
2,573,362	-				+0.3
2,573,362	-				-0.7
2,573,362	-				+0.3
2,573,362	-				+0.3
2,573,362	-				+0.3
2,573,362	-				+0.3
2,573,445	+		Pf6N2E2_2168	0.15	+0.3
2,573,865	+		Pf6N2E2_2168	0.81	-1.7
2,573,865	+		Pf6N2E2_2168	0.81	-1.7
2,573,866	-		Pf6N2E2_2168	0.81	-2.0
2,573,866	-		Pf6N2E2_2168	0.81	+0.3
2,573,901	+		Pf6N2E2_2168	0.86	+0.3
2,573,902	-		Pf6N2E2_2168	0.86	-1.7
2,573,902	-		Pf6N2E2_2168	0.86	-0.7
2,573,902	-		Pf6N2E2_2168	0.86	+0.3
2,573,902	-		Pf6N2E2_2168	0.86	+0.3
2,573,966	+				-0.7
2,573,966	+				-0.7
2,573,966	+				-1.3
2,573,966	+				+0.3
2,573,966	+				-1.0
2,573,966	+				-0.7
2,573,967	-				-0.7
2,574,043	+				+0.3
2,574,043	+				+0.3
2,574,043	+				-1.0
2,574,044	-				-1.3
2,574,044	-				-1.1
2,574,044	-				-0.7
2,574,078	-				-1.3
2,574,078	-				-0.9
2,574,108	+				+0.3
2,574,109	-				-0.7
2,574,135	+				-1.5
2,574,136	-				+0.3
2,574,153	-				+0.3
2,574,162	+				-0.4
2,574,162	+				+0.3
2,574,162	+				+0.3
2,574,162	+				+0.3
2,574,162	+				+0.3
2,574,162	+				+0.3
2,574,163	-				-0.7
2,574,163	-				-0.7
2,574,163	-				+0.3
2,574,163	-				-1.1
2,574,163	-				+0.3
2,574,163	-				+1.1
2,574,163	-				+0.3
2,574,163	-				+0.3
2,574,163	-				-0.1
2,574,163	-				-0.7
2,574,163	-				+0.3
2,574,163	-				-1.1
2,574,163	-				+0.3
2,574,374	+		Pf6N2E2_2169	0.25	-0.7
2,574,413	+		Pf6N2E2_2169	0.27	-0.7
2,574,413	+		Pf6N2E2_2169	0.27	-0.7
2,574,414	-		Pf6N2E2_2169	0.28	+0.3
2,574,414	-		Pf6N2E2_2169	0.28	-1.3
2,574,414	-		Pf6N2E2_2169	0.28	+0.3
2,574,486	+		Pf6N2E2_2169	0.33	-0.7
2,574,486	+		Pf6N2E2_2169	0.33	+0.3
2,574,486	+		Pf6N2E2_2169	0.33	+0.3
2,574,486	+		Pf6N2E2_2169	0.33	-1.5
2,574,486	+		Pf6N2E2_2169	0.33	+0.3
2,574,487	-		Pf6N2E2_2169	0.33	-0.7
2,574,487	-		Pf6N2E2_2169	0.33	-2.7
2,574,513	+		Pf6N2E2_2169	0.35	+0.3
2,574,514	-		Pf6N2E2_2169	0.35	+0.3
2,574,714	+		Pf6N2E2_2169	0.49	-3.1
2,574,714	+		Pf6N2E2_2169	0.49	-0.6
2,574,749	+		Pf6N2E2_2169	0.52	-0.7
2,574,758	+		Pf6N2E2_2169	0.53	-0.3
2,574,758	+		Pf6N2E2_2169	0.53	-0.7
2,574,759	-		Pf6N2E2_2169	0.53	+0.3
2,574,858	-		Pf6N2E2_2169	0.60	+0.3
2,574,858	-		Pf6N2E2_2169	0.60	+0.3
2,574,922	-		Pf6N2E2_2169	0.65	+0.3
2,574,963	+		Pf6N2E2_2169	0.68	+0.1