Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2148

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,552,980	+				+0.3
2,552,980	+				+0.3
2,552,980	+				-1.1
2,552,980	+				+0.3
2,552,980	+				+0.3
2,552,981	-				-1.3
2,553,008	+				+0.3
2,553,008	+				+0.3
2,553,009	-				-0.7
2,553,034	+				-0.3
2,553,035	-				-0.6
2,553,057	-				-0.5
2,553,199	+		Pf6N2E2_2147	0.14	-0.7
2,553,199	+		Pf6N2E2_2147	0.14	-0.7
2,553,199	+		Pf6N2E2_2147	0.14	-0.3
2,553,199	+		Pf6N2E2_2147	0.14	-0.7
2,553,199	+		Pf6N2E2_2147	0.14	-2.5
2,553,199	+		Pf6N2E2_2147	0.14	+0.3
2,553,199	+		Pf6N2E2_2147	0.14	-0.7
2,553,199	+		Pf6N2E2_2147	0.14	-0.7
2,553,199	+		Pf6N2E2_2147	0.14	+0.3
2,553,199	+		Pf6N2E2_2147	0.14	+0.3
2,553,199	+		Pf6N2E2_2147	0.14	+0.3
2,553,200	-		Pf6N2E2_2147	0.14	-0.5
2,553,200	-		Pf6N2E2_2147	0.14	+0.3
2,553,200	-		Pf6N2E2_2147	0.14	-0.7
2,553,200	-		Pf6N2E2_2147	0.14	+0.3
2,553,200	-		Pf6N2E2_2147	0.14	-0.7
2,553,200	-		Pf6N2E2_2147	0.14	-2.0
2,553,200	-		Pf6N2E2_2147	0.14	+0.3
2,553,200	-		Pf6N2E2_2147	0.14	-2.9
2,553,200	-		Pf6N2E2_2147	0.14	+0.3
2,553,200	-		Pf6N2E2_2147	0.14	+0.3
2,553,200	-		Pf6N2E2_2147	0.14	-0.7
2,553,200	-		Pf6N2E2_2147	0.14	-1.7
2,553,200	-		Pf6N2E2_2147	0.14	+0.3
2,553,200	-		Pf6N2E2_2147	0.14	+0.3
2,553,200	-		Pf6N2E2_2147	0.14	-0.7
2,553,200	-		Pf6N2E2_2147	0.14	+0.3
2,553,200	-		Pf6N2E2_2147	0.14	+0.3
2,553,200	-		Pf6N2E2_2147	0.14	+0.9
2,553,728	+		Pf6N2E2_2147	0.76	+0.3
2,553,729	-		Pf6N2E2_2147	0.76	-1.5
2,553,904	+				-0.7
2,553,904	+				+0.3
2,553,904	+				-0.7
2,553,905	-				-0.4
2,553,905	-				+0.3
2,553,905	-				+0.3
2,554,042	-		Pf6N2E2_2148	0.16	-0.3
2,554,096	-		Pf6N2E2_2148	0.23	-0.7
2,554,173	+		Pf6N2E2_2148	0.34	+0.3
2,554,173	+		Pf6N2E2_2148	0.34	+0.3
2,554,173	+		Pf6N2E2_2148	0.34	-0.7
2,554,174	-		Pf6N2E2_2148	0.35	+0.3
2,554,174	-		Pf6N2E2_2148	0.35	-0.7
2,554,200	+		Pf6N2E2_2148	0.38	-1.4
2,554,344	+		Pf6N2E2_2148	0.59	+0.3
2,554,560	+		Pf6N2E2_2148	0.90	-0.7
2,554,560	+		Pf6N2E2_2148	0.90	+0.3
2,554,561	-				+0.3
2,554,678	+				-0.6
2,554,678	+				-3.0
2,554,678	+				+0.3
2,554,679	-				+0.3
2,554,707	-				+0.3
2,554,759	+				+0.3
2,554,759	+				+0.3
2,554,760	-				-0.7
2,554,779	+				+0.3
2,554,779	+				+0.3
2,554,780	-				+0.3
2,554,780	-				+0.3
2,554,939	+				-1.7
2,554,939	+				+0.3
2,554,939	+				+0.3
2,554,940	-				-0.7
2,554,940	-				-0.4
2,554,940	-				-0.7
2,554,943	+				-0.7
2,554,944	-				+0.3
2,554,944	-				-0.7
2,554,944	-				-0.0
2,555,210	+		Pf6N2E2_2149	0.41	-0.7
2,555,211	-		Pf6N2E2_2149	0.41	-2.0
2,555,211	-		Pf6N2E2_2149	0.41	-0.7
2,555,211	-		Pf6N2E2_2149	0.41	-0.7
2,555,267	+		Pf6N2E2_2149	0.49	-1.3
2,555,267	+		Pf6N2E2_2149	0.49	-0.7
2,555,268	-		Pf6N2E2_2149	0.49	+0.3
2,555,269	+		Pf6N2E2_2149	0.49	-0.6
2,555,269	+		Pf6N2E2_2149	0.49	+0.3
2,555,270	-		Pf6N2E2_2149	0.49	+0.3
2,555,270	-		Pf6N2E2_2149	0.49	-1.3
2,555,270	-		Pf6N2E2_2149	0.49	-0.5
2,555,270	-		Pf6N2E2_2149	0.49	+0.3
2,555,270	-		Pf6N2E2_2149	0.49	-0.7
2,555,273	+		Pf6N2E2_2149	0.50	+0.3
2,555,273	+		Pf6N2E2_2149	0.50	-0.7
2,555,273	+		Pf6N2E2_2149	0.50	-1.6
2,555,273	+		Pf6N2E2_2149	0.50	+0.3
2,555,273	+		Pf6N2E2_2149	0.50	+0.3
2,555,273	+		Pf6N2E2_2149	0.50	-0.7
2,555,273	+		Pf6N2E2_2149	0.50	+0.3
2,555,273	+		Pf6N2E2_2149	0.50	+0.3
2,555,273	+		Pf6N2E2_2149	0.50	-1.3
2,555,274	-		Pf6N2E2_2149	0.50	-0.7
2,555,274	-		Pf6N2E2_2149	0.50	-0.9
2,555,274	-		Pf6N2E2_2149	0.50	+0.3
2,555,274	-		Pf6N2E2_2149	0.50	-0.8
2,555,274	-		Pf6N2E2_2149	0.50	-0.7
2,555,274	-		Pf6N2E2_2149	0.50	-1.3
2,555,274	-		Pf6N2E2_2149	0.50	-1.3
2,555,274	-		Pf6N2E2_2149	0.50	+0.3
2,555,274	-		Pf6N2E2_2149	0.50	+0.3
2,555,274	-		Pf6N2E2_2149	0.50	+0.3
2,555,274	-		Pf6N2E2_2149	0.50	-3.0
2,555,274	-		Pf6N2E2_2149	0.50	+0.3
2,555,274	-		Pf6N2E2_2149	0.50	-2.9
2,555,274	-		Pf6N2E2_2149	0.50	+0.3
2,555,274	-		Pf6N2E2_2149	0.50	+0.3
2,555,274	-		Pf6N2E2_2149	0.50	-0.4
2,555,274	-		Pf6N2E2_2149	0.50	-1.7
2,555,274	-		Pf6N2E2_2149	0.50	-0.5
2,555,274	-		Pf6N2E2_2149	0.50	-0.4
2,555,276	-		Pf6N2E2_2149	0.50	+0.3
2,555,276	-		Pf6N2E2_2149	0.50	+0.3
2,555,276	-		Pf6N2E2_2149	0.50	-1.3
2,555,339	+		Pf6N2E2_2149	0.59	-0.7
2,555,340	-		Pf6N2E2_2149	0.59	-1.0
2,555,340	-		Pf6N2E2_2149	0.59	-0.7
2,555,390	+		Pf6N2E2_2149	0.66	+0.0
2,555,391	-		Pf6N2E2_2149	0.67	-0.4
2,555,391	-		Pf6N2E2_2149	0.67	+0.3
2,555,408	+		Pf6N2E2_2149	0.69	+0.3
2,555,408	+		Pf6N2E2_2149	0.69	+0.3
2,555,409	-		Pf6N2E2_2149	0.69	-1.3
2,555,409	-		Pf6N2E2_2149	0.69	+0.3
2,555,409	-		Pf6N2E2_2149	0.69	+0.3
2,555,409	-		Pf6N2E2_2149	0.69	+0.3
2,555,409	-		Pf6N2E2_2149	0.69	-0.4
2,555,409	-		Pf6N2E2_2149	0.69	-2.0
2,555,409	-		Pf6N2E2_2149	0.69	+0.3
2,555,409	-		Pf6N2E2_2149	0.69	-0.7
2,555,409	-		Pf6N2E2_2149	0.69	+0.3
2,555,430	-		Pf6N2E2_2149	0.72	+0.3
2,555,525	+		Pf6N2E2_2149	0.86	+0.3
2,555,525	+		Pf6N2E2_2149	0.86	+0.3
2,555,526	-		Pf6N2E2_2149	0.86	+0.3
2,555,526	-		Pf6N2E2_2149	0.86	+0.3
2,555,526	-		Pf6N2E2_2149	0.86	+0.3
2,555,579	+				-0.7
2,555,579	+				+0.3
2,555,580	-				-0.7
2,555,580	-				-1.7
2,555,580	-				-0.7
2,555,580	-				-1.3
2,555,580	-				+1.3
2,555,580	-				-0.7
2,555,580	-				-1.3