Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1966

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,331,173	-		Pf6N2E2_1965	0.85	-0.7
2,331,564	+				+0.3
2,331,570	+				-0.7
2,331,572	+				+0.3
2,331,642	+				+0.3
2,331,643	-				+0.3
2,331,643	-				+0.5
2,331,707	+				-0.7
2,331,726	-				+0.3
2,331,726	-				-2.5
2,331,726	-				-0.7
2,331,786	+				-0.7
2,331,787	-				+0.3
2,331,835	+				-0.7
2,331,836	-				+0.3
2,331,899	-				+0.3
2,331,911	+				-0.7
2,331,911	+				+0.3
2,331,914	-				+0.3
2,331,929	+				-0.9
2,331,929	+				+0.3
2,331,930	-				-0.7
2,332,102	+				-0.7
2,332,103	-				+0.3
2,332,103	-				+0.3
2,332,213	+				-0.7
2,332,217	+				+0.3
2,332,217	+				+1.9
2,332,218	-				-0.4
2,332,593	+		Pf6N2E2_1966	0.65	-0.7
2,332,611	+		Pf6N2E2_1966	0.67	-0.7
2,332,611	+		Pf6N2E2_1966	0.67	+0.3
2,332,612	-		Pf6N2E2_1966	0.67	+0.3
2,332,716	-		Pf6N2E2_1966	0.83	-0.7
2,332,785	+				-0.7
2,332,795	+				+0.3
2,332,817	+				+0.3
2,332,854	+				-1.3
2,332,854	+				-0.7
2,332,927	+				-0.4
2,332,928	-				-0.7
2,332,951	+				-0.7
2,332,951	+				-0.7
2,333,124	-				-1.2
2,333,124	-				+0.3
2,333,159	-				+0.3
2,333,193	-				+0.3
2,333,213	-				+0.3
2,333,213	-				+0.3
2,333,244	+				+0.3
2,333,245	-				+0.3
2,333,254	+				+0.3
2,333,254	+				-1.5
2,333,254	+				+0.3
2,333,254	+				+0.3
2,333,255	-				-1.1
2,333,255	-				+0.3
2,333,255	-				+0.3
2,333,255	-				+0.3
2,333,470	+		Pf6N2E2_1967	0.29	+0.3
2,333,470	+		Pf6N2E2_1967	0.29	+0.3
2,333,470	+		Pf6N2E2_1967	0.29	-0.7
2,333,471	-		Pf6N2E2_1967	0.29	-0.7
2,333,471	-		Pf6N2E2_1967	0.29	-0.7
2,333,479	+		Pf6N2E2_1967	0.31	+0.3
2,333,479	+		Pf6N2E2_1967	0.31	+0.3
2,333,479	+		Pf6N2E2_1967	0.31	-1.3
2,333,479	+		Pf6N2E2_1967	0.31	+0.3
2,333,479	+		Pf6N2E2_1967	0.31	+0.3
2,333,480	-		Pf6N2E2_1967	0.31	+0.3
2,333,499	+		Pf6N2E2_1967	0.34	-0.7
2,333,500	-		Pf6N2E2_1967	0.34	+0.3
2,333,562	+		Pf6N2E2_1967	0.44	+0.3
2,333,563	-		Pf6N2E2_1967	0.44	+0.3
2,333,647	+		Pf6N2E2_1967	0.57	-1.0
2,333,647	+		Pf6N2E2_1967	0.57	+0.3
2,333,647	+		Pf6N2E2_1967	0.57	+0.3
2,333,647	+		Pf6N2E2_1967	0.57	+0.3
2,333,647	+		Pf6N2E2_1967	0.57	+0.3
2,333,647	+		Pf6N2E2_1967	0.57	+0.3
2,333,648	-		Pf6N2E2_1967	0.57	-0.7
2,333,648	-		Pf6N2E2_1967	0.57	+0.3
2,333,648	-		Pf6N2E2_1967	0.57	+0.9
2,333,648	-		Pf6N2E2_1967	0.57	+0.3
2,333,648	-		Pf6N2E2_1967	0.57	-0.7
2,333,648	-		Pf6N2E2_1967	0.57	+0.3
2,333,801	-		Pf6N2E2_1967	0.82	+0.3
2,333,809	+		Pf6N2E2_1967	0.83	-0.7