Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1875

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,222,711	-		Pf6N2E2_1874	0.81	-0.7
2,222,892	+				+0.3
2,222,929	-				-0.7
2,223,001	-				+0.3
2,223,137	+				-1.3
2,223,138	-				+0.3
2,223,160	-				-0.7
2,223,304	+		Pf6N2E2_1875	0.20	-0.7
2,223,573	-		Pf6N2E2_1875	0.40	+0.3
2,223,759	+		Pf6N2E2_1875	0.54	-0.7
2,224,249	+				-2.1
2,224,315	-				+0.3
2,224,396	-				-2.1
2,224,454	-				-1.0
2,224,542	+				-0.4
2,224,543	-				+0.3
2,224,543	-				-0.9
2,224,672	+		Pf6N2E2_1876	0.19	+0.3
2,224,673	-		Pf6N2E2_1876	0.19	+0.3
2,225,113	-		Pf6N2E2_1876	0.50	+0.3
2,225,230	-		Pf6N2E2_1876	0.59	-0.7