Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1803

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,131,678	+				+0.2
2,131,678	+				-0.8
2,131,679	-				-2.8
2,131,687	+				-2.8
2,131,688	-				-0.8
2,131,688	-				+0.2
2,131,688	-				+0.2
2,131,751	+				-0.7
2,131,751	+				-0.8
2,131,752	-				+0.2
2,131,838	+		Pf6N2E2_1802	0.14	-1.1
2,131,945	-		Pf6N2E2_1802	0.27	+0.4
2,132,176	+		Pf6N2E2_1802	0.54	+1.8
2,132,177	-		Pf6N2E2_1802	0.54	+0.2
2,132,181	-		Pf6N2E2_1802	0.55	-0.3
2,132,214	-		Pf6N2E2_1802	0.59	+0.2
2,132,282	+		Pf6N2E2_1802	0.67	-0.8
2,132,298	-		Pf6N2E2_1802	0.69	+0.2
2,132,298	-		Pf6N2E2_1802	0.69	+0.2
2,132,403	+		Pf6N2E2_1802	0.81	+0.2
2,132,502	+				-0.8
2,133,114	+		Pf6N2E2_1803	0.63	-1.3
2,133,115	-		Pf6N2E2_1803	0.63	+0.2
2,133,172	-		Pf6N2E2_1803	0.69	+0.2
2,133,234	+		Pf6N2E2_1803	0.76	+0.2
2,133,235	-		Pf6N2E2_1803	0.76	-1.8
2,133,440	-				+0.2
2,133,541	+				+0.2
2,134,345	-		Pf6N2E2_1804	0.65	+0.2
2,134,424	+		Pf6N2E2_1804	0.71	+0.2
2,134,425	-		Pf6N2E2_1804	0.71	+0.2