Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1776

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,100,418	-				-0.8
2,100,418	-				-1.3
2,100,418	-				-0.7
2,100,647	+		Pf6N2E2_1775	0.31	+0.2
2,100,648	-		Pf6N2E2_1775	0.31	+0.2
2,100,648	-		Pf6N2E2_1775	0.31	-0.3
2,100,653	-		Pf6N2E2_1775	0.31	-0.8
2,100,831	-		Pf6N2E2_1775	0.48	-0.6
2,100,831	-		Pf6N2E2_1775	0.48	+0.2
2,100,865	+		Pf6N2E2_1775	0.51	-0.8
2,100,866	-		Pf6N2E2_1775	0.51	-1.3
2,101,196	-		Pf6N2E2_1775	0.82	+0.2
2,101,273	-		Pf6N2E2_1775	0.89	-0.8
2,101,391	-				-1.3
2,101,418	-				+0.2
2,101,418	-				+0.2
2,101,466	-		Pf6N2E2_1776	0.21	-0.8
2,101,596	-		Pf6N2E2_1776	0.57	-0.8
2,101,596	-		Pf6N2E2_1776	0.57	+0.2
2,101,768	-				-0.8
2,101,827	+				+0.2
2,101,831	+				-0.8
2,101,831	+				-0.8
2,101,831	+				+0.2
2,101,831	+				+0.2
2,101,831	+				+0.2
2,101,831	+				+0.2
2,101,832	-				-0.3
2,101,832	-				+0.2
2,101,832	-				-1.8
2,101,880	+				-0.8
2,101,920	+				+0.2
2,101,924	+				-0.8
2,101,924	+				+0.2
2,101,924	+				+0.2
2,101,925	-				-1.6
2,101,925	-				-1.3
2,101,925	-				+0.2
2,102,030	+		Pf6N2E2_1777	0.16	-1.3
2,102,031	-		Pf6N2E2_1777	0.16	-0.4
2,102,058	+		Pf6N2E2_1777	0.20	+0.2
2,102,058	+		Pf6N2E2_1777	0.20	+0.2
2,102,058	+		Pf6N2E2_1777	0.20	-0.8
2,102,059	-		Pf6N2E2_1777	0.20	+0.2
2,102,059	-		Pf6N2E2_1777	0.20	+0.2
2,102,140	+		Pf6N2E2_1777	0.30	+0.2
2,102,140	+		Pf6N2E2_1777	0.30	+0.8
2,102,208	+		Pf6N2E2_1777	0.38	-0.5
2,102,208	+		Pf6N2E2_1777	0.38	+0.2
2,102,208	+		Pf6N2E2_1777	0.38	+0.2
2,102,209	-		Pf6N2E2_1777	0.38	+0.2
2,102,362	-		Pf6N2E2_1777	0.57	+0.2
2,102,398	+		Pf6N2E2_1777	0.62	-0.8
2,102,398	+		Pf6N2E2_1777	0.62	-0.8
2,102,399	-		Pf6N2E2_1777	0.62	-0.4
2,102,399	-		Pf6N2E2_1777	0.62	-0.8
2,102,399	-		Pf6N2E2_1777	0.62	-0.8
2,102,403	-		Pf6N2E2_1777	0.62	+0.2
2,102,547	+		Pf6N2E2_1777	0.80	-1.1
2,102,550	+		Pf6N2E2_1777	0.81	+0.2
2,102,551	-		Pf6N2E2_1777	0.81	-0.8
2,102,551	-		Pf6N2E2_1777	0.81	-0.8
2,102,551	-		Pf6N2E2_1777	0.81	+0.2
2,102,559	+		Pf6N2E2_1777	0.82	-0.8
2,102,631	-				+0.2