Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1741

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,052,782	+				+0.2
2,052,782	+				+0.2
2,052,845	-		Pf6N2E2_1740	0.16	+0.2
2,052,845	-		Pf6N2E2_1740	0.16	+0.2
2,053,313	+		Pf6N2E2_1740	0.62	-0.3
2,053,313	+		Pf6N2E2_1740	0.62	-0.8
2,053,371	-		Pf6N2E2_1740	0.68	-0.6
2,053,629	-				+0.2
2,053,629	-				+0.2
2,053,665	-				+0.2
2,053,792	+		Pf6N2E2_1741	0.11	+0.2
2,053,793	-		Pf6N2E2_1741	0.11	+0.2
2,054,107	+		Pf6N2E2_1741	0.47	-0.8
2,054,107	+		Pf6N2E2_1741	0.47	-0.8
2,054,118	+		Pf6N2E2_1741	0.48	-0.8
2,054,119	-		Pf6N2E2_1741	0.48	-0.8
2,054,399	-		Pf6N2E2_1741	0.80	+0.2
2,054,399	-		Pf6N2E2_1741	0.80	-0.6
2,054,399	-		Pf6N2E2_1741	0.80	-2.1
2,054,401	+		Pf6N2E2_1741	0.80	-0.8
2,054,444	-		Pf6N2E2_1741	0.85	-1.8
2,054,899	+				-0.8
2,054,899	+				+0.2
2,054,899	+				-0.8
2,054,899	+				+0.2
2,054,899	+				+0.2
2,054,900	-				-0.8
2,054,900	-				+0.2
2,054,900	-				-0.8
2,054,900	-				+0.2
2,054,926	+		Pf6N2E2_1742	0.11	+0.2
2,054,926	+		Pf6N2E2_1742	0.11	+0.2
2,054,927	-		Pf6N2E2_1742	0.11	+0.0
2,055,341	-		Pf6N2E2_1742	0.41	-0.4