Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1605

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
1,876,349	+		Pf6N2E2_1604	0.76	-0.8
1,876,374	+		Pf6N2E2_1604	0.81	+0.3
1,876,500	+				+0.3
1,876,500	+				-0.7
1,876,819	+				-0.5
1,876,819	+				-0.2
1,877,251	-				-0.7
1,877,269	-				-1.3
1,877,269	-				+0.3
1,877,523	-		Pf6N2E2_1605	0.15	-2.0
1,877,524	+		Pf6N2E2_1605	0.15	+0.3
1,877,525	-		Pf6N2E2_1605	0.15	+0.3
1,877,525	-		Pf6N2E2_1605	0.15	-2.1
1,877,581	+		Pf6N2E2_1605	0.19	+0.3
1,877,582	-		Pf6N2E2_1605	0.19	+0.3
1,877,582	-		Pf6N2E2_1605	0.19	+0.3
1,877,791	+		Pf6N2E2_1605	0.36	-2.3
1,877,792	-		Pf6N2E2_1605	0.36	-2.3
1,877,792	-		Pf6N2E2_1605	0.36	-1.3
1,877,792	-		Pf6N2E2_1605	0.36	+0.3
1,877,878	+		Pf6N2E2_1605	0.43	-0.3
1,877,879	-		Pf6N2E2_1605	0.43	+0.3
1,878,196	+		Pf6N2E2_1605	0.68	+0.3
1,878,196	+		Pf6N2E2_1605	0.68	-2.1
1,878,196	+		Pf6N2E2_1605	0.68	+0.3
1,878,201	-		Pf6N2E2_1605	0.69	-2.4
1,878,262	+		Pf6N2E2_1605	0.74	-1.7
1,878,262	+		Pf6N2E2_1605	0.74	+0.3
1,878,262	+		Pf6N2E2_1605	0.74	+0.3
1,878,571	-				-0.8
1,878,630	-				+0.2
1,878,797	+		Pf6N2E2_1606	0.17	+0.2
1,878,845	+		Pf6N2E2_1606	0.21	+0.2
1,878,845	+		Pf6N2E2_1606	0.21	-1.3
1,878,846	-		Pf6N2E2_1606	0.21	-1.8
1,878,956	+		Pf6N2E2_1606	0.32	-2.5
1,878,957	-		Pf6N2E2_1606	0.32	+0.2
1,879,242	+		Pf6N2E2_1606	0.58	-1.3
1,879,242	+		Pf6N2E2_1606	0.58	+0.2
1,879,242	+		Pf6N2E2_1606	0.58	-0.8
1,879,242	+		Pf6N2E2_1606	0.58	+0.2
1,879,243	-		Pf6N2E2_1606	0.58	-2.1
1,879,479	-		Pf6N2E2_1606	0.79	-0.8
1,879,526	+		Pf6N2E2_1606	0.83	+0.2
1,879,556	+		Pf6N2E2_1606	0.86	-0.8
1,879,556	+		Pf6N2E2_1606	0.86	+0.2