Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1603

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
1,874,508	-				-0.6
1,874,543	+				+0.3
1,874,543	+				-1.2
1,874,543	+				+0.3
1,874,766	+		Pf6N2E2_1602	0.30	+0.3
1,874,766	+		Pf6N2E2_1602	0.30	+0.3
1,874,768	+		Pf6N2E2_1602	0.30	+0.3
1,874,768	+		Pf6N2E2_1602	0.30	-0.5
1,874,831	+		Pf6N2E2_1602	0.38	+0.3
1,874,936	+		Pf6N2E2_1602	0.52	-1.3
1,875,005	+		Pf6N2E2_1602	0.61	+0.3
1,875,154	-		Pf6N2E2_1602	0.80	+0.3
1,875,402	-				+0.3
1,875,402	-				-2.1
1,875,402	-				+0.3
1,875,404	-				-0.7
1,875,418	-				+0.3
1,875,419	+				-0.3
1,875,444	+				+0.3
1,875,445	-				+0.3
1,875,499	+				-0.7
1,875,518	-				-1.0
1,875,521	+		Pf6N2E2_1603	0.10	-0.7
1,875,521	+		Pf6N2E2_1603	0.10	-1.3
1,875,522	-		Pf6N2E2_1603	0.11	+0.3
1,875,522	-		Pf6N2E2_1603	0.11	-0.7
1,875,626	+		Pf6N2E2_1603	0.35	+0.3
1,875,822	-		Pf6N2E2_1603	0.81	-0.7
1,875,929	-				+0.3
1,875,961	-				-0.1
1,875,969	-				+0.3
1,876,085	+		Pf6N2E2_1604	0.24	+0.3
1,876,085	+		Pf6N2E2_1604	0.24	-0.2
1,876,085	+		Pf6N2E2_1604	0.24	+0.3
1,876,085	+		Pf6N2E2_1604	0.24	-0.7
1,876,085	+		Pf6N2E2_1604	0.24	+0.3
1,876,086	-		Pf6N2E2_1604	0.24	+0.3
1,876,086	-		Pf6N2E2_1604	0.24	-0.7
1,876,086	-		Pf6N2E2_1604	0.24	+0.3
1,876,086	-		Pf6N2E2_1604	0.24	-0.7
1,876,313	+		Pf6N2E2_1604	0.69	-0.6
1,876,349	+		Pf6N2E2_1604	0.76	-0.8
1,876,374	+		Pf6N2E2_1604	0.81	+0.3
1,876,500	+				+0.3
1,876,500	+				-0.7
1,876,819	+				-0.5
1,876,819	+				-0.2