Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1583

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
1,851,835	-		Pf6N2E2_1582	0.35	+0.3
1,851,881	+		Pf6N2E2_1582	0.38	+0.3
1,851,881	+		Pf6N2E2_1582	0.38	+0.3
1,852,118	+		Pf6N2E2_1582	0.56	+0.3
1,853,013	+		Pf6N2E2_1583	0.19	+0.3
1,853,013	+		Pf6N2E2_1583	0.19	+0.3
1,853,092	-		Pf6N2E2_1583	0.23	+0.3
1,853,547	+		Pf6N2E2_1583	0.49	-0.7
1,853,547	+		Pf6N2E2_1583	0.49	-0.3
1,853,566	+		Pf6N2E2_1583	0.50	+0.3
1,853,676	+		Pf6N2E2_1583	0.56	-0.3
1,853,723	-		Pf6N2E2_1583	0.59	-1.1
1,853,875	-		Pf6N2E2_1583	0.67	-1.0
1,854,024	+		Pf6N2E2_1583	0.76	-3.1
1,854,024	+		Pf6N2E2_1583	0.76	-0.7
1,854,025	-		Pf6N2E2_1583	0.76	-0.7
1,854,163	+		Pf6N2E2_1583	0.83	-0.9
1,854,163	+		Pf6N2E2_1583	0.83	-0.7
1,854,163	+		Pf6N2E2_1583	0.83	+0.3
1,854,165	+		Pf6N2E2_1583	0.84	+0.3
1,854,166	-		Pf6N2E2_1583	0.84	-0.7
1,854,245	+		Pf6N2E2_1583	0.88	-1.3
1,854,295	+				-0.2
1,854,339	+				+0.3
1,854,340	-				+0.3
1,854,351	-				+0.3
1,854,495	-				+0.3
1,854,519	-				+0.3
1,854,776	+		Pf6N2E2_1584	0.22	-0.7
1,854,882	-		Pf6N2E2_1584	0.34	-0.6
1,855,006	-		Pf6N2E2_1584	0.47	-1.7
1,855,129	-		Pf6N2E2_1584	0.61	+0.3
1,855,172	+		Pf6N2E2_1584	0.65	+0.3
1,855,173	-		Pf6N2E2_1584	0.66	+0.3
1,855,412	+				+0.3
1,855,413	-				-0.6