Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1561

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
1,821,903	-				+0.0
1,821,903	-				-0.7
1,822,028	-		Pf6N2E2_1560	0.19	-0.7
1,822,373	+		Pf6N2E2_1560	0.57	+0.3
1,822,373	+		Pf6N2E2_1560	0.57	+0.3
1,822,558	+		Pf6N2E2_1560	0.77	-0.7
1,822,558	+		Pf6N2E2_1560	0.77	+1.8
1,822,703	+				-0.7
1,822,730	+				+0.3
1,822,795	-				+0.3
1,822,799	+				+0.3
1,822,799	+				-0.2
1,822,886	+				-0.4
1,822,887	-				-0.7
1,822,887	-				-0.7
1,823,027	+		Pf6N2E2_1561	0.25	-1.3
1,823,027	+		Pf6N2E2_1561	0.25	+0.3
1,823,027	+		Pf6N2E2_1561	0.25	+0.3
1,823,090	+		Pf6N2E2_1561	0.35	+0.3
1,823,179	+		Pf6N2E2_1561	0.50	-2.1
1,823,180	-		Pf6N2E2_1561	0.51	+0.3
1,823,225	-		Pf6N2E2_1561	0.58	+0.3
1,823,279	+		Pf6N2E2_1561	0.67	-0.9
1,823,279	+		Pf6N2E2_1561	0.67	-1.3
1,823,280	-		Pf6N2E2_1561	0.67	+0.3
1,823,342	+		Pf6N2E2_1561	0.78	+0.3
1,823,342	+		Pf6N2E2_1561	0.78	+0.3
1,823,342	+		Pf6N2E2_1561	0.78	+0.3
1,823,342	+		Pf6N2E2_1561	0.78	-1.5
1,823,343	-		Pf6N2E2_1561	0.78	-1.7
1,823,343	-		Pf6N2E2_1561	0.78	+0.3
1,823,343	-		Pf6N2E2_1561	0.78	+0.3
1,823,343	-		Pf6N2E2_1561	0.78	+0.3
1,823,475	-				+0.3
1,823,650	+				-1.7
1,823,651	-				+0.3
1,823,651	-				-0.7
1,823,666	+				-0.9
1,823,782	+		Pf6N2E2_1562	0.16	-0.7
1,823,782	+		Pf6N2E2_1562	0.16	+0.3
1,823,782	+		Pf6N2E2_1562	0.16	-0.7
1,823,783	-		Pf6N2E2_1562	0.16	+1.1
1,823,783	-		Pf6N2E2_1562	0.16	-2.5
1,823,785	+		Pf6N2E2_1562	0.16	+0.3
1,823,786	-		Pf6N2E2_1562	0.16	+0.3
1,823,826	+		Pf6N2E2_1562	0.20	-1.3
1,823,851	+		Pf6N2E2_1562	0.23	+0.3
1,823,851	+		Pf6N2E2_1562	0.23	+0.3
1,823,851	+		Pf6N2E2_1562	0.23	+0.3
1,823,851	+		Pf6N2E2_1562	0.23	+0.3
1,823,851	+		Pf6N2E2_1562	0.23	-1.3
1,823,851	+		Pf6N2E2_1562	0.23	+0.3
1,823,852	-		Pf6N2E2_1562	0.23	+0.3
1,823,852	-		Pf6N2E2_1562	0.23	+0.3
1,823,852	-		Pf6N2E2_1562	0.23	+0.3
1,823,852	-		Pf6N2E2_1562	0.23	-0.7
1,823,852	-		Pf6N2E2_1562	0.23	-0.7
1,823,907	-		Pf6N2E2_1562	0.29	-0.3
1,823,907	-		Pf6N2E2_1562	0.29	-2.7
1,824,064	+		Pf6N2E2_1562	0.45	+0.3
1,824,064	+		Pf6N2E2_1562	0.45	+0.3
1,824,065	-		Pf6N2E2_1562	0.45	+0.3
1,824,065	-		Pf6N2E2_1562	0.45	+0.3
1,824,110	-		Pf6N2E2_1562	0.50	-0.7
1,824,276	-		Pf6N2E2_1562	0.67	-0.3