Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1424

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
1,671,599	+		Pf6N2E2_1423	0.78	+0.3
1,671,651	-		Pf6N2E2_1423	0.82	-0.7
1,671,651	-		Pf6N2E2_1423	0.82	-1.3
1,671,740	+		Pf6N2E2_1423	0.89	+0.3
1,671,741	-		Pf6N2E2_1423	0.89	-0.1
1,672,151	+				-1.3
1,672,170	-				-1.8
1,672,170	-				+0.2
1,672,307	+				+0.2
1,672,389	+				+0.2
1,672,390	-				+0.2
1,672,390	-				+0.2
1,672,569	-		Pf6N2E2_1424	0.25	-2.6
1,672,686	-		Pf6N2E2_1424	0.44	+0.2
1,672,994	-				-0.8
1,673,147	+				+0.2
1,673,148	-				-1.2
1,673,182	+				+0.3
1,673,182	+				+0.4
1,673,182	+				-0.2
1,673,183	-				+0.3
1,673,184	+				+0.3
1,673,184	+				+0.3
1,673,184	+				+0.3
1,673,184	+				+0.3
1,673,184	+				-1.3
1,673,184	+				+0.3
1,673,184	+				+0.3
1,673,184	+				-0.7
1,673,184	+				-0.7
1,673,184	+				-0.7
1,673,184	+				-0.5
1,673,185	-				+0.3
1,673,185	-				-0.7
1,673,185	-				+0.3
1,673,185	-				+0.3
1,673,185	-				-0.7
1,673,185	-				-0.5
1,673,185	-				+0.3
1,673,185	-				+0.3
1,673,185	-				+0.3
1,673,185	-				+0.3
1,673,185	-				+0.3
1,673,185	-				+0.3
1,673,298	+		Pf6N2E2_1425	0.20	+0.3
1,673,298	+		Pf6N2E2_1425	0.20	+0.3
1,673,298	+		Pf6N2E2_1425	0.20	+0.3
1,673,299	-		Pf6N2E2_1425	0.20	+0.3
1,673,299	-		Pf6N2E2_1425	0.20	+0.3
1,673,313	+		Pf6N2E2_1425	0.21	+0.3
1,673,523	+		Pf6N2E2_1425	0.40	+0.3
1,673,524	-		Pf6N2E2_1425	0.40	+0.3
1,673,684	-		Pf6N2E2_1425	0.55	+0.3
1,673,713	+		Pf6N2E2_1425	0.58	+0.3
1,673,714	-		Pf6N2E2_1425	0.58	+0.3
1,673,714	-		Pf6N2E2_1425	0.58	+0.3
1,673,761	+		Pf6N2E2_1425	0.62	+0.3
1,673,763	+		Pf6N2E2_1425	0.62	+0.3
1,673,763	+		Pf6N2E2_1425	0.62	-0.2