Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1147

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
1,343,483	+		Pf6N2E2_1146	0.18	+0.2
1,343,483	+		Pf6N2E2_1146	0.18	+0.2
1,343,720	+		Pf6N2E2_1146	0.39	-1.2
1,343,720	+		Pf6N2E2_1146	0.39	+0.2
1,343,720	+		Pf6N2E2_1146	0.39	-0.8
1,343,720	+		Pf6N2E2_1146	0.39	+0.2
1,343,720	+		Pf6N2E2_1146	0.39	+0.2
1,343,721	-		Pf6N2E2_1146	0.39	-0.8
1,343,721	-		Pf6N2E2_1146	0.39	+0.2
1,343,972	+		Pf6N2E2_1146	0.61	+0.2
1,343,972	+		Pf6N2E2_1146	0.61	-0.8
1,343,973	-		Pf6N2E2_1146	0.61	+0.2
1,344,068	+		Pf6N2E2_1146	0.69	+0.2
1,344,069	-		Pf6N2E2_1146	0.70	+0.2
1,344,179	+		Pf6N2E2_1146	0.79	+0.2
1,344,362	+				+0.2
1,344,362	+				+0.2
1,344,362	+				+1.2
1,344,363	-				-1.3
1,344,363	-				-1.8
1,344,363	-				-0.8
1,344,363	-				+0.2
1,344,363	-				-0.8
1,344,433	-				-0.8
1,344,433	-				-2.3
1,344,433	-				-0.8
1,344,660	+		Pf6N2E2_1147	0.30	-2.3
1,344,661	-		Pf6N2E2_1147	0.30	+1.2
1,345,031	+		Pf6N2E2_1147	0.78	+0.2
1,345,032	-				+0.2
1,345,193	+				-0.8
1,345,193	+				+0.2
1,345,193	+				+0.2
1,345,194	-				+0.2
1,345,197	+				-0.8
1,345,197	+				-0.8
1,345,197	+				-0.7
1,345,197	+				+0.2
1,345,198	-				+0.2
1,345,423	+				-0.8
1,345,423	+				+0.2
1,345,424	-				-0.8
1,345,441	+				-0.4
1,345,476	+				+0.2
1,345,477	-				-0.8
1,345,495	+				-1.1
1,345,495	+				+0.2
1,345,495	+				-0.3
1,345,496	-				+0.2
1,345,496	-				+0.1
1,345,496	-				-0.2
1,345,522	+				-0.2
1,345,525	+				-0.8
1,345,526	-				-0.8
1,345,526	-				+0.2
1,345,789	+		Pf6N2E2_1148	0.31	+0.2
1,346,012	+		Pf6N2E2_1148	0.50	+0.2