Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1038

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
1,210,474	+				+0.3
1,210,474	+				-0.7
1,210,475	-				+0.3
1,210,475	-				-0.7
1,210,501	-				+0.3
1,210,501	-				+0.3
1,210,501	-				-0.5
1,210,558	+				+0.3
1,210,559	-				-0.7
1,210,559	-				+0.3
1,210,562	+				-0.2
1,210,592	+				+0.3
1,210,662	+				+0.3
1,210,662	+				-0.6
1,210,662	+				+0.3
1,210,662	+				-0.3
1,210,662	+				+0.3
1,210,663	-				+0.3
1,210,699	+				-0.7
1,210,699	+				+0.3
1,210,699	+				+0.3
1,210,699	+				-0.8
1,210,799	+				+0.3
1,210,873	-				+0.3
1,210,873	-				+0.3
1,210,876	+				-1.3
1,210,876	+				-0.4
1,210,953	+		Pf6N2E2_1037	0.15	+0.3
1,211,050	+		Pf6N2E2_1037	0.41	+0.3
1,211,206	+		Pf6N2E2_1037	0.81	+0.3
1,211,223	+		Pf6N2E2_1037	0.86	-1.7
1,211,224	-		Pf6N2E2_1037	0.86	-2.3
1,211,224	-		Pf6N2E2_1037	0.86	-0.7
1,211,224	-		Pf6N2E2_1037	0.86	-0.7
1,211,224	-		Pf6N2E2_1037	0.86	+0.3
1,211,260	+				+0.3
1,211,344	+				-1.3
1,211,344	+				+0.3
1,211,344	+				-0.5
1,211,344	+				-0.9
1,211,345	-				-0.1
1,211,357	+				+0.3
1,211,357	+				-0.7
1,211,357	+				-0.7
1,211,357	+				-0.4
1,211,357	+				+0.3
1,211,357	+				-0.7
1,211,417	+				-0.7
1,211,472	-				-0.7
1,211,550	+		Pf6N2E2_1038	0.10	+0.3
1,211,550	+		Pf6N2E2_1038	0.10	+1.3
1,211,551	-		Pf6N2E2_1038	0.10	+0.3
1,211,677	-		Pf6N2E2_1038	0.20	+0.3
1,211,701	-		Pf6N2E2_1038	0.22	-1.2
1,211,701	-		Pf6N2E2_1038	0.22	+0.3
1,211,742	+		Pf6N2E2_1038	0.25	+0.3
1,211,742	+		Pf6N2E2_1038	0.25	-0.7
1,211,742	+		Pf6N2E2_1038	0.25	+0.3
1,211,742	+		Pf6N2E2_1038	0.25	-0.7
1,211,742	+		Pf6N2E2_1038	0.25	-0.7
1,211,742	+		Pf6N2E2_1038	0.25	-1.3
1,211,742	+		Pf6N2E2_1038	0.25	+0.3
1,211,742	+		Pf6N2E2_1038	0.25	-1.3
1,211,743	-		Pf6N2E2_1038	0.25	+0.3
1,211,743	-		Pf6N2E2_1038	0.25	-0.7
1,211,743	-		Pf6N2E2_1038	0.25	-1.4
1,211,743	-		Pf6N2E2_1038	0.25	-0.7
1,211,743	-		Pf6N2E2_1038	0.25	+0.3
1,211,743	-		Pf6N2E2_1038	0.25	+0.3
1,211,743	-		Pf6N2E2_1038	0.25	+0.3
1,211,743	-		Pf6N2E2_1038	0.25	+0.3
1,211,743	-		Pf6N2E2_1038	0.25	-1.3
1,212,140	+		Pf6N2E2_1038	0.56	+0.3
1,212,140	+		Pf6N2E2_1038	0.56	+0.3
1,212,286	+		Pf6N2E2_1038	0.67	+0.3
1,212,286	+		Pf6N2E2_1038	0.67	-0.9
1,212,286	+		Pf6N2E2_1038	0.67	+0.3
1,212,287	-		Pf6N2E2_1038	0.67	-1.2
1,212,354	+		Pf6N2E2_1038	0.73	-0.7
1,212,354	+		Pf6N2E2_1038	0.73	+0.3
1,212,354	+		Pf6N2E2_1038	0.73	-0.3
1,212,354	+		Pf6N2E2_1038	0.73	+0.3
1,212,354	+		Pf6N2E2_1038	0.73	+0.3
1,212,354	+		Pf6N2E2_1038	0.73	-1.2
1,212,354	+		Pf6N2E2_1038	0.73	+0.3
1,212,354	+		Pf6N2E2_1038	0.73	+0.3
1,212,354	+		Pf6N2E2_1038	0.73	-0.7
1,212,355	-		Pf6N2E2_1038	0.73	+0.3
1,212,355	-		Pf6N2E2_1038	0.73	+0.3
1,212,355	-		Pf6N2E2_1038	0.73	-1.3
1,212,355	-		Pf6N2E2_1038	0.73	-0.4
1,212,355	-		Pf6N2E2_1038	0.73	+0.3
1,212,355	-		Pf6N2E2_1038	0.73	+0.3
1,212,355	-		Pf6N2E2_1038	0.73	+0.3
1,212,355	-		Pf6N2E2_1038	0.73	+0.3
1,212,355	-		Pf6N2E2_1038	0.73	-0.7
1,212,359	-		Pf6N2E2_1038	0.73	+0.3
1,212,629	+				-0.4
1,212,663	+				+0.3
1,212,663	+				-1.5
1,212,663	+				-0.5
1,212,664	-				+0.3
1,212,687	+				-0.5
1,212,814	-				+0.3
1,212,911	-		Pf6N2E2_1039	0.11	+0.3
1,213,027	-		Pf6N2E2_1039	0.23	+0.3
1,213,261	-		Pf6N2E2_1039	0.48	+0.3
1,213,266	+		Pf6N2E2_1039	0.49	-0.5
1,213,317	+		Pf6N2E2_1039	0.54	+0.3
1,213,318	-		Pf6N2E2_1039	0.55	-0.7
1,213,318	-		Pf6N2E2_1039	0.55	-1.7
1,213,500	+		Pf6N2E2_1039	0.74	-0.7
1,213,500	+		Pf6N2E2_1039	0.74	-0.7
1,213,572	+		Pf6N2E2_1039	0.82	-0.7
1,213,572	+		Pf6N2E2_1039	0.82	+0.3