Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1028

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
1,200,903	+		Pf6N2E2_1026	0.90	+0.3
1,201,052	+				-0.3
1,201,053	-				+0.3
1,201,064	-				-0.6
1,201,157	+		Pf6N2E2_1027	0.15	+0.3
1,201,481	+		Pf6N2E2_1027	0.66	+0.3
1,201,481	+		Pf6N2E2_1027	0.66	-0.7
1,201,481	+		Pf6N2E2_1027	0.66	+0.3
1,201,482	-				+0.3
1,201,482	-		Pf6N2E2_1027	0.66	-0.7
1,201,832	+				-1.1
1,201,864	-				+0.7
1,201,864	-				-0.8
1,201,864	-				+0.3
1,202,449	+		Pf6N2E2_1028	0.62	-0.7
1,202,449	+		Pf6N2E2_1028	0.62	+0.3
1,202,449	+		Pf6N2E2_1028	0.62	-0.7
1,202,704	+		Pf6N2E2_1028	0.90	-0.7
1,202,881	-				+0.3
1,202,899	+				+0.3
1,202,946	+				+0.3
1,203,058	+		Pf6N2E2_1029	0.17	-0.7
1,203,058	+		Pf6N2E2_1029	0.17	+0.3
1,203,058	+		Pf6N2E2_1029	0.17	+0.3
1,203,059	-		Pf6N2E2_1029	0.17	+0.8
1,203,059	-		Pf6N2E2_1029	0.17	+0.3
1,203,059	-		Pf6N2E2_1029	0.17	+0.3
1,203,193	-		Pf6N2E2_1029	0.34	-0.5
1,203,220	+		Pf6N2E2_1029	0.37	+0.3
1,203,446	+		Pf6N2E2_1029	0.66	+0.8
1,203,446	+		Pf6N2E2_1029	0.66	+0.3
1,203,447	-		Pf6N2E2_1029	0.66	+0.3
1,203,746	-				-0.3
1,203,760	+				+0.3