Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5590

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
6,406,574	+		Pf6N2E2_5589	0.21	-1.6
6,406,574	+		Pf6N2E2_5589	0.21	+0.4
6,406,574	+		Pf6N2E2_5589	0.21	-0.6
6,406,574	+		Pf6N2E2_5589	0.21	+0.4
6,406,575	-		Pf6N2E2_5589	0.21	+1.0
6,406,575	-		Pf6N2E2_5589	0.21	-0.6
6,406,576	+		Pf6N2E2_5589	0.21	+0.4
6,406,576	+		Pf6N2E2_5589	0.21	+0.4
6,406,577	-		Pf6N2E2_5589	0.21	-0.6
6,406,577	-		Pf6N2E2_5589	0.21	+0.0
6,406,758	+		Pf6N2E2_5589	0.40	-0.6
6,406,759	-		Pf6N2E2_5589	0.40	-0.2
6,407,158	+		Pf6N2E2_5589	0.81	-0.7
6,407,159	-		Pf6N2E2_5589	0.81	+0.4
6,407,159	-		Pf6N2E2_5589	0.81	+1.0
6,407,378	-				-0.6
6,407,378	-				-2.1
6,407,398	+				+0.4
6,408,825	+				+0.5
6,408,825	+				+0.5
6,408,825	+				+0.5
6,408,825	+				+0.5
6,408,826	-				-2.7
6,408,826	-				+0.5
6,408,826	-				+0.5
6,408,826	-				-0.5
6,408,826	-				+0.5
6,408,834	+		Pf6N2E2_5591	0.10	+0.5
6,408,834	+		Pf6N2E2_5591	0.10	-1.5
6,408,834	+		Pf6N2E2_5591	0.10	-0.2
6,408,834	+		Pf6N2E2_5591	0.10	+0.5
6,408,835	-		Pf6N2E2_5591	0.10	-1.0
6,408,835	-		Pf6N2E2_5591	0.10	-0.1
6,408,905	+		Pf6N2E2_5591	0.25	+0.5
6,408,905	+		Pf6N2E2_5591	0.25	-0.5
6,408,905	+		Pf6N2E2_5591	0.25	+0.5
6,408,905	+		Pf6N2E2_5591	0.25	+0.5
6,408,910	+		Pf6N2E2_5591	0.26	-0.5
6,408,910	+		Pf6N2E2_5591	0.26	-0.9
6,408,911	-		Pf6N2E2_5591	0.26	+0.5
6,408,920	-		Pf6N2E2_5591	0.28	-2.1
6,408,920	-		Pf6N2E2_5591	0.28	-1.3
6,408,950	+		Pf6N2E2_5591	0.34	-1.4
6,408,950	+		Pf6N2E2_5591	0.34	+0.5
6,408,951	-		Pf6N2E2_5591	0.34	-1.5
6,408,951	-		Pf6N2E2_5591	0.34	+0.5
6,408,951	-		Pf6N2E2_5591	0.34	+0.5
6,408,986	+		Pf6N2E2_5591	0.42	-1.1
6,408,987	-		Pf6N2E2_5591	0.42	-0.5
6,408,987	-		Pf6N2E2_5591	0.42	-1.1
6,408,987	-		Pf6N2E2_5591	0.42	-0.5
6,408,987	-		Pf6N2E2_5591	0.42	-0.5
6,408,987	-		Pf6N2E2_5591	0.42	-1.1
6,409,029	-		Pf6N2E2_5591	0.51	-0.2
6,409,149	+		Pf6N2E2_5591	0.75	-1.9
6,409,217	+		Pf6N2E2_5591	0.89	-1.4
6,409,217	+		Pf6N2E2_5591	0.89	+0.5
6,409,271	+				+0.5
6,409,385	+				+0.5
6,409,392	+				-0.5
6,409,396	+				+0.5
6,409,491	+				-0.5
6,409,619	+				+0.5
6,409,619	+				+0.5
6,409,626	+				+0.5
6,409,627	-				+0.5
6,409,677	-				+0.5
6,409,691	+				+0.5