Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4767

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
5,504,542	+		Pf6N2E2_4766	0.60	-0.5
5,504,542	+		Pf6N2E2_4766	0.60	-1.0
5,504,542	+		Pf6N2E2_4766	0.60	-1.1
5,504,543	-		Pf6N2E2_4766	0.61	-1.1
5,504,543	-		Pf6N2E2_4766	0.61	-2.0
5,504,543	-		Pf6N2E2_4766	0.61	-1.5
5,504,543	-		Pf6N2E2_4766	0.61	-1.1
5,504,575	+		Pf6N2E2_4766	0.62	-2.1
5,504,575	+		Pf6N2E2_4766	0.62	-0.5
5,504,575	+		Pf6N2E2_4766	0.62	+0.5
5,504,575	+		Pf6N2E2_4766	0.62	-0.5
5,504,576	-		Pf6N2E2_4766	0.62	-2.7
5,504,576	-		Pf6N2E2_4766	0.62	-1.9
5,504,695	+		Pf6N2E2_4766	0.69	-1.2
5,504,695	+		Pf6N2E2_4766	0.69	+0.5
5,504,695	+		Pf6N2E2_4766	0.69	+0.5
5,504,695	+		Pf6N2E2_4766	0.69	-1.1
5,504,754	+		Pf6N2E2_4766	0.72	-0.8
5,504,754	+		Pf6N2E2_4766	0.72	-1.1
5,504,754	+		Pf6N2E2_4766	0.72	+0.5
5,504,754	+		Pf6N2E2_4766	0.72	+0.5
5,504,755	-		Pf6N2E2_4766	0.72	+0.5
5,504,767	+		Pf6N2E2_4766	0.73	-1.1
5,504,767	+		Pf6N2E2_4766	0.73	-1.1
5,504,767	+		Pf6N2E2_4766	0.73	-1.3
5,504,767	+		Pf6N2E2_4766	0.73	+0.5
5,504,767	+		Pf6N2E2_4766	0.73	-1.9
5,504,912	+		Pf6N2E2_4766	0.81	-1.1
5,504,912	+		Pf6N2E2_4766	0.81	-0.9
5,504,912	+		Pf6N2E2_4766	0.81	-1.5
5,505,016	+		Pf6N2E2_4766	0.87	-0.5
5,505,016	+		Pf6N2E2_4766	0.87	-1.1
5,505,025	+		Pf6N2E2_4766	0.87	-2.3
5,505,026	-		Pf6N2E2_4766	0.87	+0.5
5,505,034	+		Pf6N2E2_4766	0.88	-0.5
5,505,049	+		Pf6N2E2_4766	0.89	-0.5
5,505,049	+		Pf6N2E2_4766	0.89	-0.6
5,505,050	-		Pf6N2E2_4766	0.89	+0.5
5,505,118	+				-1.6
5,505,118	+				-1.5
5,505,118	+				-1.4
5,505,118	+				-2.7
5,505,118	+				-2.1
5,505,119	-				-0.5
5,505,119	-				-0.5
5,505,119	-				+0.5
5,505,119	-				-1.4
5,505,119	-				-1.0
5,505,119	-				-0.5
5,505,148	+				+0.5
5,505,148	+				-0.5
5,505,148	+				-1.5
5,505,148	+				+0.5
5,505,149	-				+0.5
5,505,149	-				-0.5
5,505,222	+				-1.2
5,505,223	-				-0.5
5,505,223	-				-1.1
5,505,251	-				+0.5
5,505,253	+				-0.2
5,505,253	+				+0.5
5,505,253	+				+0.5
5,505,254	-				+1.5
5,505,254	-				-0.5
5,505,254	-				+0.5
5,505,385	+				+0.5
5,505,385	+				+0.5
5,505,386	-				-1.1
5,505,386	-				+0.5
5,505,404	+				-1.1
5,505,405	-				-2.1
5,505,405	-				-1.9
5,505,405	-				-0.5
5,505,470	+				+0.5
5,505,470	+				+0.5
5,505,547	+				+0.5
5,505,547	+				-0.5
5,505,548	-				-1.1
5,505,548	-				-1.0
5,505,606	+				-0.5
5,505,606	+				+0.5
5,505,607	-				-0.5
5,505,607	-				+0.5
5,505,667	+		Pf6N2E2_4767	0.13	-0.2
5,505,667	+		Pf6N2E2_4767	0.13	-0.8
5,505,668	-		Pf6N2E2_4767	0.13	-0.5
5,505,684	+		Pf6N2E2_4767	0.14	+0.5
5,505,696	+		Pf6N2E2_4767	0.15	+0.5
5,505,736	-		Pf6N2E2_4767	0.18	-0.5
5,505,736	-		Pf6N2E2_4767	0.18	+0.5
5,505,736	-		Pf6N2E2_4767	0.18	-0.5
5,505,745	-		Pf6N2E2_4767	0.19	-0.5
5,505,960	+		Pf6N2E2_4767	0.35	+0.5
5,505,961	-		Pf6N2E2_4767	0.35	-0.5
5,506,045	-		Pf6N2E2_4767	0.41	+0.5
5,506,086	+		Pf6N2E2_4767	0.44	-1.7
5,506,087	-		Pf6N2E2_4767	0.44	-1.1
5,506,087	-		Pf6N2E2_4767	0.44	+0.6
5,506,087	-		Pf6N2E2_4767	0.44	-0.5
5,506,243	-		Pf6N2E2_4767	0.56	-0.7
5,506,326	+		Pf6N2E2_4767	0.63	-1.1
5,506,326	+		Pf6N2E2_4767	0.63	-1.1
5,506,326	+		Pf6N2E2_4767	0.63	+0.5
5,506,326	+		Pf6N2E2_4767	0.63	-2.1
5,506,326	+		Pf6N2E2_4767	0.63	+0.5
5,506,326	+		Pf6N2E2_4767	0.63	-0.5
5,506,327	-		Pf6N2E2_4767	0.63	-0.5
5,506,327	-		Pf6N2E2_4767	0.63	+0.5
5,506,327	-		Pf6N2E2_4767	0.63	-1.1
5,506,327	-		Pf6N2E2_4767	0.63	-0.5
5,506,327	-		Pf6N2E2_4767	0.63	+0.5
5,506,327	-		Pf6N2E2_4767	0.63	-0.6
5,506,327	-		Pf6N2E2_4767	0.63	-1.1
5,506,327	-		Pf6N2E2_4767	0.63	-0.6
5,506,554	+		Pf6N2E2_4767	0.80	-0.5
5,506,554	+		Pf6N2E2_4767	0.80	+0.5
5,506,554	+		Pf6N2E2_4767	0.80	+0.5
5,506,554	+		Pf6N2E2_4767	0.80	-0.1
5,506,554	+		Pf6N2E2_4767	0.80	-0.5
5,506,554	+		Pf6N2E2_4767	0.80	-1.1
5,506,555	-		Pf6N2E2_4767	0.80	-0.5
5,506,555	-		Pf6N2E2_4767	0.80	-0.5
5,506,555	-		Pf6N2E2_4767	0.80	-1.5
5,506,555	-		Pf6N2E2_4767	0.80	-0.5
5,506,555	-		Pf6N2E2_4767	0.80	-0.5
5,506,555	-		Pf6N2E2_4767	0.80	-0.5
5,506,555	-		Pf6N2E2_4767	0.80	-0.5
5,506,555	-		Pf6N2E2_4767	0.80	-1.2
5,506,728	+				-0.7
5,506,729	-				-0.1
5,506,751	+				-0.5
5,506,751	+				-1.1
5,506,752	-				-0.5
5,506,874	+				-0.5
5,506,874	+				-0.8
5,506,875	-				+0.5
5,506,918	+				+0.5
5,506,981	+				-1.5
5,507,120	+		Pf6N2E2_4768	0.12	-0.5
5,507,120	+		Pf6N2E2_4768	0.12	-0.2
5,507,120	+		Pf6N2E2_4768	0.12	+0.5
5,507,120	+		Pf6N2E2_4768	0.12	-1.1
5,507,120	+		Pf6N2E2_4768	0.12	-0.2
5,507,121	-		Pf6N2E2_4768	0.12	-0.4
5,507,121	-		Pf6N2E2_4768	0.12	+0.5
5,507,121	-		Pf6N2E2_4768	0.12	+0.5
5,507,161	+		Pf6N2E2_4768	0.14	-0.3
5,507,161	+		Pf6N2E2_4768	0.14	+0.5
5,507,161	+		Pf6N2E2_4768	0.14	-0.5
5,507,161	+		Pf6N2E2_4768	0.14	+0.5
5,507,161	+		Pf6N2E2_4768	0.14	-1.1
5,507,161	+		Pf6N2E2_4768	0.14	-0.3
5,507,162	-		Pf6N2E2_4768	0.14	-0.5
5,507,162	-		Pf6N2E2_4768	0.14	+0.5
5,507,162	-		Pf6N2E2_4768	0.14	+0.5
5,507,162	-		Pf6N2E2_4768	0.14	-0.9
5,507,162	-		Pf6N2E2_4768	0.14	+0.5
5,507,162	-		Pf6N2E2_4768	0.14	+0.5
5,507,162	-		Pf6N2E2_4768	0.14	-0.7
5,507,162	-		Pf6N2E2_4768	0.14	+0.5
5,507,162	-		Pf6N2E2_4768	0.14	-1.1
5,507,223	+		Pf6N2E2_4768	0.17	+0.5
5,507,223	+		Pf6N2E2_4768	0.17	+0.5
5,507,223	+		Pf6N2E2_4768	0.17	-1.3
5,507,224	-		Pf6N2E2_4768	0.18	+0.5
5,507,224	-		Pf6N2E2_4768	0.18	+1.7
5,507,284	+		Pf6N2E2_4768	0.21	-0.5
5,507,284	+		Pf6N2E2_4768	0.21	+0.5
5,507,285	-		Pf6N2E2_4768	0.21	-0.5
5,507,285	-		Pf6N2E2_4768	0.21	+0.5
5,507,285	-		Pf6N2E2_4768	0.21	-0.5
5,507,285	-		Pf6N2E2_4768	0.21	+0.5
5,507,353	+		Pf6N2E2_4768	0.25	-1.1
5,507,353	+		Pf6N2E2_4768	0.25	+0.5
5,507,353	+		Pf6N2E2_4768	0.25	+0.5
5,507,353	+		Pf6N2E2_4768	0.25	-0.5
5,507,354	-		Pf6N2E2_4768	0.25	+0.5
5,507,354	-		Pf6N2E2_4768	0.25	+0.5
5,507,354	-		Pf6N2E2_4768	0.25	+0.5