Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4739

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
5,475,223	+		Pf6N2E2_4738	0.45	+0.5
5,475,224	-		Pf6N2E2_4738	0.46	+0.5
5,475,341	-		Pf6N2E2_4738	0.54	+0.5
5,475,341	-		Pf6N2E2_4738	0.54	-0.5
5,475,352	+		Pf6N2E2_4738	0.55	+0.5
5,475,430	-		Pf6N2E2_4738	0.60	-1.1
5,475,630	-		Pf6N2E2_4738	0.74	-0.8
5,475,630	-		Pf6N2E2_4738	0.74	-0.6
5,475,645	+		Pf6N2E2_4738	0.75	+0.5
5,475,645	+		Pf6N2E2_4738	0.75	+0.5
5,475,645	+		Pf6N2E2_4738	0.75	-0.5
5,475,645	+		Pf6N2E2_4738	0.75	+0.5
5,475,646	-		Pf6N2E2_4738	0.75	+0.5
5,475,646	-		Pf6N2E2_4738	0.75	-0.5
5,475,646	-		Pf6N2E2_4738	0.75	-1.1
5,475,646	-		Pf6N2E2_4738	0.75	-0.5
5,475,729	+		Pf6N2E2_4738	0.81	-1.2
5,475,824	-		Pf6N2E2_4738	0.88	-1.1
5,475,853	+		Pf6N2E2_4738	0.90	-0.5
5,476,052	-				-1.5
5,476,052	-				+0.5
5,476,078	+				+0.5
5,476,078	+				-0.7
5,476,078	+				-1.8
5,476,078	+				+0.5
5,476,078	+				-1.1
5,476,079	-				-0.6
5,476,082	+				-0.9
5,476,082	+				+0.5
5,476,082	+				+0.5
5,476,082	+				-1.1
5,476,082	+				-1.5
5,476,083	-				-1.1
5,476,137	+				-0.5
5,476,138	-				+0.5
5,476,172	+				-0.2
5,476,172	+				-1.1
5,476,172	+				-0.0
5,476,172	+				+0.5
5,476,173	-				+0.5
5,476,173	-				-1.1
5,476,173	-				-0.5
5,476,243	+				-0.5
5,476,243	+				+0.5
5,476,243	+				-0.9
5,476,244	-				-0.7
5,476,324	+		Pf6N2E2_4739	0.16	-0.5
5,476,324	+		Pf6N2E2_4739	0.16	+0.5
5,476,324	+		Pf6N2E2_4739	0.16	-1.1
5,476,324	+		Pf6N2E2_4739	0.16	+0.5
5,476,324	+		Pf6N2E2_4739	0.16	+0.5
5,476,325	-		Pf6N2E2_4739	0.16	-0.5
5,476,363	+		Pf6N2E2_4739	0.20	+0.5
5,476,364	-		Pf6N2E2_4739	0.20	-1.5
5,476,416	+		Pf6N2E2_4739	0.25	-0.2
5,476,417	-		Pf6N2E2_4739	0.26	-1.8
5,476,417	-		Pf6N2E2_4739	0.26	+0.1
5,476,417	-		Pf6N2E2_4739	0.26	-0.5
5,476,420	+		Pf6N2E2_4739	0.26	-2.1
5,476,420	+		Pf6N2E2_4739	0.26	-0.5
5,476,420	+		Pf6N2E2_4739	0.26	+0.5
5,476,420	+		Pf6N2E2_4739	0.26	+0.5
5,476,420	+		Pf6N2E2_4739	0.26	-1.1
5,476,420	+		Pf6N2E2_4739	0.26	-0.5
5,476,420	+		Pf6N2E2_4739	0.26	-1.1
5,476,420	+		Pf6N2E2_4739	0.26	-1.1
5,476,421	-		Pf6N2E2_4739	0.26	-0.9
5,476,421	-		Pf6N2E2_4739	0.26	+0.5
5,476,421	-		Pf6N2E2_4739	0.26	-0.5
5,476,421	-		Pf6N2E2_4739	0.26	-0.5
5,476,421	-		Pf6N2E2_4739	0.26	-0.5
5,476,421	-		Pf6N2E2_4739	0.26	+0.5
5,476,597	-		Pf6N2E2_4739	0.44	-0.1
5,476,597	-		Pf6N2E2_4739	0.44	-0.5
5,476,682	-		Pf6N2E2_4739	0.53	-0.5
5,476,781	-		Pf6N2E2_4739	0.63	-1.8
5,476,876	-		Pf6N2E2_4739	0.73	-1.1
5,476,885	+		Pf6N2E2_4739	0.74	+0.5
5,476,885	+		Pf6N2E2_4739	0.74	-0.4
5,476,885	+		Pf6N2E2_4739	0.74	+0.5
5,476,890	+		Pf6N2E2_4739	0.74	-1.1
5,476,890	+		Pf6N2E2_4739	0.74	-1.1
5,476,890	+		Pf6N2E2_4739	0.74	+0.2
5,476,891	-		Pf6N2E2_4739	0.74	-1.1
5,476,891	-		Pf6N2E2_4739	0.74	+0.5
5,476,891	-		Pf6N2E2_4739	0.74	+0.5
5,476,891	-		Pf6N2E2_4739	0.74	-2.1
5,476,980	+		Pf6N2E2_4739	0.83	-0.5
5,476,980	+		Pf6N2E2_4739	0.83	-1.1
5,476,980	+		Pf6N2E2_4739	0.83	-1.1
5,476,980	+		Pf6N2E2_4739	0.83	+0.5
5,476,980	+		Pf6N2E2_4739	0.83	-0.5
5,476,980	+		Pf6N2E2_4739	0.83	-0.5
5,476,980	+		Pf6N2E2_4739	0.83	-0.5
5,476,980	+		Pf6N2E2_4739	0.83	+0.5
5,476,980	+		Pf6N2E2_4739	0.83	+0.1
5,476,980	+		Pf6N2E2_4739	0.83	-0.3
5,476,980	+		Pf6N2E2_4739	0.83	-1.1
5,476,980	+		Pf6N2E2_4739	0.83	+0.5
5,476,980	+		Pf6N2E2_4739	0.83	-1.1
5,476,980	+		Pf6N2E2_4739	0.83	+0.5
5,476,980	+		Pf6N2E2_4739	0.83	+0.5
5,476,981	-		Pf6N2E2_4739	0.83	-0.5
5,476,981	-		Pf6N2E2_4739	0.83	-0.9
5,476,981	-		Pf6N2E2_4739	0.83	+0.5
5,476,981	-		Pf6N2E2_4739	0.83	-0.3
5,476,981	-		Pf6N2E2_4739	0.83	-0.5
5,477,217	-				+0.5
5,477,237	+				-1.5
5,477,238	-				+0.5
5,477,344	+		Pf6N2E2_4740	0.11	-0.2
5,477,345	-		Pf6N2E2_4740	0.11	-0.7
5,477,345	-		Pf6N2E2_4740	0.11	+0.5
5,477,409	+		Pf6N2E2_4740	0.15	-0.5
5,477,410	-		Pf6N2E2_4740	0.16	-1.5
5,477,467	+		Pf6N2E2_4740	0.20	-1.2
5,477,468	-		Pf6N2E2_4740	0.20	+0.5
5,477,468	-		Pf6N2E2_4740	0.20	-0.2
5,477,533	+		Pf6N2E2_4740	0.24	+0.5
5,477,533	+		Pf6N2E2_4740	0.24	+0.5
5,477,533	+		Pf6N2E2_4740	0.24	-0.5
5,477,534	-		Pf6N2E2_4740	0.25	-0.5
5,477,534	-		Pf6N2E2_4740	0.25	-0.5
5,477,534	-		Pf6N2E2_4740	0.25	-0.7
5,477,534	-		Pf6N2E2_4740	0.25	+0.5
5,477,534	-		Pf6N2E2_4740	0.25	+0.5
5,477,534	-		Pf6N2E2_4740	0.25	-0.5
5,477,546	+		Pf6N2E2_4740	0.25	-1.3
5,477,547	-		Pf6N2E2_4740	0.25	+0.5
5,477,644	+		Pf6N2E2_4740	0.33	+0.5
5,477,644	+		Pf6N2E2_4740	0.33	+0.5
5,477,645	-		Pf6N2E2_4740	0.33	-0.5
5,477,645	-		Pf6N2E2_4740	0.33	-0.5
5,477,926	+		Pf6N2E2_4740	0.53	+0.5
5,477,926	+		Pf6N2E2_4740	0.53	+0.5
5,477,926	+		Pf6N2E2_4740	0.53	+0.5
5,477,926	+		Pf6N2E2_4740	0.53	+0.5
5,477,927	-		Pf6N2E2_4740	0.53	-0.5
5,477,927	-		Pf6N2E2_4740	0.53	-1.8
5,477,927	-		Pf6N2E2_4740	0.53	-0.5
5,477,927	-		Pf6N2E2_4740	0.53	-1.1
5,477,927	-		Pf6N2E2_4740	0.53	+0.5
5,477,927	-		Pf6N2E2_4740	0.53	-0.7
5,478,036	+		Pf6N2E2_4740	0.61	-0.5
5,478,037	-		Pf6N2E2_4740	0.61	-1.8
5,478,037	-		Pf6N2E2_4740	0.61	-1.1
5,478,097	+		Pf6N2E2_4740	0.66	-1.8
5,478,124	+		Pf6N2E2_4740	0.67	+0.3
5,478,124	+		Pf6N2E2_4740	0.67	+0.5
5,478,124	+		Pf6N2E2_4740	0.67	-0.5
5,478,124	+		Pf6N2E2_4740	0.67	+0.5
5,478,124	+		Pf6N2E2_4740	0.67	+0.5
5,478,124	+		Pf6N2E2_4740	0.67	+0.5
5,478,125	-		Pf6N2E2_4740	0.68	-1.1
5,478,125	-		Pf6N2E2_4740	0.68	+0.5
5,478,125	-		Pf6N2E2_4740	0.68	-1.1
5,478,125	-		Pf6N2E2_4740	0.68	-0.5
5,478,125	-		Pf6N2E2_4740	0.68	+1.1
5,478,125	-		Pf6N2E2_4740	0.68	-0.6
5,478,125	-		Pf6N2E2_4740	0.68	-0.7
5,478,125	-		Pf6N2E2_4740	0.68	+0.5