Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4283

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
4,985,648	+		Pf6N2E2_4282	0.17	+0.5
4,985,786	+		Pf6N2E2_4282	0.34	-1.1
4,985,816	+		Pf6N2E2_4282	0.38	-1.1
4,985,816	+		Pf6N2E2_4282	0.38	-0.1
4,985,817	-		Pf6N2E2_4282	0.38	+0.2
4,985,817	-		Pf6N2E2_4282	0.38	-0.9
4,985,868	-		Pf6N2E2_4282	0.44	-0.5
4,985,876	+		Pf6N2E2_4282	0.45	-0.8
4,985,876	+		Pf6N2E2_4282	0.45	-0.9
4,985,978	+		Pf6N2E2_4282	0.57	-1.1
4,985,978	+		Pf6N2E2_4282	0.57	-0.3
4,985,978	+		Pf6N2E2_4282	0.57	+0.5
4,985,979	-		Pf6N2E2_4282	0.58	-0.5
4,985,979	-		Pf6N2E2_4282	0.58	+0.5
4,985,979	-		Pf6N2E2_4282	0.58	-0.5
4,985,979	-		Pf6N2E2_4282	0.58	+0.5
4,985,979	-		Pf6N2E2_4282	0.58	+0.5
4,985,981	+		Pf6N2E2_4282	0.58	-1.5
4,985,981	+		Pf6N2E2_4282	0.58	-0.7
4,985,981	+		Pf6N2E2_4282	0.58	-0.1
4,985,982	-		Pf6N2E2_4282	0.58	-1.1
4,985,982	-		Pf6N2E2_4282	0.58	+0.1
4,986,079	+		Pf6N2E2_4282	0.70	-0.5
4,986,079	+		Pf6N2E2_4282	0.70	-0.5
4,986,080	-		Pf6N2E2_4282	0.70	-1.3
4,986,080	-		Pf6N2E2_4282	0.70	-1.1
4,986,200	+		Pf6N2E2_4282	0.84	-0.5
4,986,319	+				-2.0
4,986,319	+				-0.8
4,986,320	-				-0.5
4,986,320	-				-0.5
4,986,320	-				+0.5
4,986,320	-				-1.5
4,986,351	+				+0.5
4,986,352	-				-0.1
4,986,359	-				+0.5
4,986,359	-				-0.5
4,986,380	+				+0.5
4,986,427	+				+0.5
4,986,443	-				-1.8
4,986,565	-		Pf6N2E2_4283	0.14	+0.5
4,986,584	+		Pf6N2E2_4283	0.16	+0.5
4,986,585	-		Pf6N2E2_4283	0.16	+0.5
4,986,585	-		Pf6N2E2_4283	0.16	-1.1
4,986,585	-		Pf6N2E2_4283	0.16	-0.5
4,986,585	-		Pf6N2E2_4283	0.16	+0.5
4,986,623	+		Pf6N2E2_4283	0.20	-1.5
4,986,623	+		Pf6N2E2_4283	0.20	+0.5
4,986,623	+		Pf6N2E2_4283	0.20	-1.1
4,986,624	-		Pf6N2E2_4283	0.20	-1.5
4,986,624	-		Pf6N2E2_4283	0.20	-0.5
4,986,624	-		Pf6N2E2_4283	0.20	-1.8
4,986,624	-		Pf6N2E2_4283	0.20	-1.1
4,986,624	-		Pf6N2E2_4283	0.20	+0.5
4,986,643	+		Pf6N2E2_4283	0.22	-0.5
4,986,883	+		Pf6N2E2_4283	0.49	-0.5
4,987,235	+		Pf6N2E2_4283	0.88	+0.5
4,987,236	-		Pf6N2E2_4283	0.88	-1.1
4,987,312	+				+0.5
4,987,312	+				+0.5
4,987,312	+				-0.5
4,987,312	+				+0.5
4,987,312	+				+0.5
4,987,313	-				-0.5
4,987,313	-				+0.5
4,987,313	-				-0.5
4,987,335	+				-0.5
4,987,335	+				-0.5
4,987,335	+				-0.5
4,987,336	-				+0.3
4,987,537	+				-0.5
4,987,538	-				-0.5
4,987,569	-				-0.5
4,987,569	-				+0.5
4,987,569	-				-0.5
4,987,569	-				+0.5
4,987,570	+				-0.5
4,987,570	+				+0.5
4,987,570	+				+0.5
4,987,570	+				-0.5
4,987,570	+				-1.5
4,987,570	+				-1.1
4,987,570	+				-0.5
4,987,570	+				-0.1
4,987,570	+				-0.5
4,987,570	+				+0.5
4,987,570	+				+0.5
4,987,570	+				+0.5
4,987,570	+				+0.5
4,987,570	+				+0.5
4,987,570	+				+0.5
4,987,570	+				+0.5
4,987,570	+				-0.5
4,987,570	+				-1.8
4,987,570	+				-1.1
4,987,571	-				+0.5
4,987,571	-				-0.5
4,987,571	-				-0.9
4,987,571	-				+0.5
4,987,571	-				+0.5
4,987,571	-				-0.5
4,987,571	-				+0.5
4,987,571	-				+0.5
4,987,571	-				+0.5
4,987,571	-				-0.5
4,987,571	-				-0.4
4,987,571	-				-1.1
4,987,571	-				-2.1
4,987,571	-				-0.5
4,987,571	-				-1.8
4,987,571	-				-2.1
4,987,574	+				-1.1
4,987,574	+				-1.5
4,987,574	+				+0.5
4,987,574	+				-0.5
4,987,574	+				-0.5
4,987,574	+				-0.5
4,987,574	+				-0.7
4,987,574	+				-0.5
4,987,574	+				-1.1
4,987,574	+				-1.1
4,987,574	+				-0.5
4,987,574	+				+0.5
4,987,574	+				-1.5
4,987,574	+				-0.5
4,987,574	+				-0.5
4,987,574	+				-0.5
4,987,574	+				+0.5
4,987,574	+				-1.5
4,987,574	+				-1.1
4,987,574	+				-2.0
4,987,574	+				-0.5
4,987,574	+				+0.5
4,987,574	+				-1.1
4,987,574	+				-0.5
4,987,574	+				-0.8
4,987,574	+				-0.8
4,987,574	+				-0.5
4,987,574	+				+0.5
4,987,574	+				-0.5
4,987,574	+				-0.5
4,987,574	+				-0.5
4,987,574	+				-1.5
4,987,574	+				-0.6
4,987,574	+				+0.5
4,987,574	+				-1.1
4,987,574	+				-0.5
4,987,574	+				+0.5
4,987,574	+				-1.5
4,987,574	+				+0.5
4,987,574	+				-1.5
4,987,574	+				-0.3
4,987,574	+				-0.5
4,987,574	+				-1.1
4,987,574	+				-0.2
4,987,574	+				-1.8
4,987,574	+				-0.1
4,987,574	+				-0.5
4,987,574	+				-1.5
4,987,574	+				-0.5
4,987,574	+				+0.5
4,987,574	+				-1.0
4,987,574	+				-0.4
4,987,574	+				+0.5
4,987,574	+				-1.8
4,987,574	+				+0.5
4,987,574	+				+0.5
4,987,574	+				+0.5
4,987,574	+				-0.5
4,987,574	+				-1.1
4,987,574	+				+1.5
4,987,574	+				+0.5
4,987,574	+				-1.1
4,987,574	+				-0.5
4,987,574	+				-1.2
4,987,574	+				+0.5
4,987,574	+				+0.5
4,987,574	+				+0.5
4,987,574	+				-0.5
4,987,574	+				+0.5
4,987,574	+				+0.5
4,987,574	+				+0.5
4,987,575	-				+0.5
4,987,575	-				-0.5
4,987,575	-				+0.5
4,987,575	-				-0.1
4,987,575	-				-0.2
4,987,575	-				+0.5
4,987,575	-				-0.1
4,987,575	-				-1.1
4,987,575	-				-1.1
4,987,575	-				+0.5
4,987,575	-				+0.5
4,987,575	-				+0.5
4,987,575	-				-1.2
4,987,575	-				-0.5
4,987,575	-				-0.5
4,987,575	-				+0.5
4,987,575	-				-1.5
4,987,575	-				-0.5
4,987,575	-				-0.3
4,987,575	-				-0.5
4,987,575	-				-1.1
4,987,575	-				-1.5
4,987,575	-				-0.7
4,987,575	-				-1.1
4,987,575	-				+0.5
4,987,575	-				-1.8
4,987,575	-				-0.1
4,987,575	-				-1.1
4,987,575	-				-1.1
4,987,575	-				-0.5
4,987,575	-				-1.5
4,987,575	-				-0.5
4,987,575	-				-1.5
4,987,575	-				-0.3
4,987,575	-				-0.6
4,987,575	-				-0.7
4,987,575	-				+0.5
4,987,575	-				-1.1
4,987,575	-				-0.5
4,987,575	-				-0.5
4,987,575	-				-0.5
4,987,575	-				-1.8
4,987,575	-				+0.5
4,987,575	-				+0.5
4,987,575	-				+0.8
4,987,575	-				-1.1
4,987,575	-				-1.5
4,987,575	-				-0.5
4,987,575	-				+0.5
4,987,575	-				-0.2
4,987,575	-				-0.8
4,987,575	-				-1.1
4,987,575	-				-0.5
4,987,575	-				-1.1
4,987,575	-				-1.1
4,987,575	-				-1.0
4,987,575	-				-0.5
4,987,575	-				+0.5
4,987,575	-				-0.3
4,987,575	-				-1.1
4,987,575	-				-1.0
4,987,575	-				-0.5
4,987,575	-				+0.5
4,987,575	-				-1.5
4,987,575	-				-0.5
4,987,575	-				-0.5
4,987,575	-				-0.5
4,987,575	-				-0.5
4,987,575	-				-0.5
4,987,575	-				-2.0
4,987,575	-				+0.5
4,987,575	-				-0.5
4,987,575	-				-1.1
4,987,575	-				-1.1
4,987,575	-				-1.8
4,987,575	-				-2.3
4,987,575	-				-1.1
4,987,575	-				-0.5
4,987,578	+				-1.3
4,987,578	+				+0.5
4,987,578	+				-0.5
4,987,578	+				+0.5
4,987,578	+				+0.5
4,987,578	+				-0.2
4,987,578	+				+0.5
4,987,578	+				+0.5
4,987,578	+				+0.5
4,987,578	+				+0.5
4,987,578	+				-0.8
4,987,578	+				+0.5
4,987,578	+				-0.5
4,987,579	-				-0.5
4,987,579	-				+0.5
4,987,579	-				-0.5
4,987,579	-				-1.0
4,987,579	-				-0.3
4,987,579	-				+0.5
4,987,579	-				-1.1
4,987,579	-				-0.5
4,987,579	-				-0.7
4,987,579	-				-1.5
4,987,579	-				+0.5
4,987,579	-				-1.8
4,987,579	-				+0.5
4,987,579	-				-2.1
4,987,579	-				-0.5
4,987,579	-				-0.1
4,987,579	-				-1.5
4,987,579	-				-0.5
4,987,579	-				+1.5
4,987,579	-				-0.9
4,987,579	-				-0.5
4,987,579	-				-0.2
4,987,579	-				-1.5
4,987,667	+				-0.9
4,987,667	+				-0.5
4,987,747	+				-0.8
4,987,747	+				-0.5
4,987,747	+				-0.5
4,987,748	-				-0.5
4,987,748	-				-0.3
4,987,748	-				-0.5
4,987,748	-				-2.3
4,987,748	-				-0.5
4,987,766	-				-0.6
4,987,809	+				-0.5
4,987,810	-				-1.2
4,987,810	-				+0.5
4,987,810	-				-1.1
4,987,826	+				-1.5
4,987,826	+				-1.5
4,988,313	+		Pf6N2E2_4284	0.12	-0.5
4,988,314	-		Pf6N2E2_4284	0.12	+0.5
4,988,328	-		Pf6N2E2_4284	0.12	+0.5
4,988,328	-		Pf6N2E2_4284	0.12	-1.8