Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3679

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
4,286,841	+				-0.0
4,286,841	+				+0.5
4,286,841	+				-0.9
4,286,843	+				-0.4
4,286,843	+				-0.3
4,286,843	+				-0.5
4,286,844	-				-0.5
4,286,881	-				-0.4
4,286,881	-				+0.5
4,286,881	-				-0.5
4,287,181	+		Pf6N2E2_3678	0.41	-0.5
4,287,181	+		Pf6N2E2_3678	0.41	+0.5
4,287,182	-		Pf6N2E2_3678	0.41	-0.3
4,287,182	-		Pf6N2E2_3678	0.41	+0.2
4,287,235	+		Pf6N2E2_3678	0.49	+0.5
4,287,235	+		Pf6N2E2_3678	0.49	-0.5
4,287,257	-		Pf6N2E2_3678	0.52	-0.5
4,287,257	-		Pf6N2E2_3678	0.52	-0.5
4,287,352	+		Pf6N2E2_3678	0.67	+0.5
4,287,352	+		Pf6N2E2_3678	0.67	-0.7
4,287,352	+		Pf6N2E2_3678	0.67	+0.5
4,287,352	+		Pf6N2E2_3678	0.67	-0.5
4,287,352	+		Pf6N2E2_3678	0.67	-0.3
4,287,352	+		Pf6N2E2_3678	0.67	+0.5
4,287,353	-		Pf6N2E2_3678	0.67	+0.5
4,287,353	-		Pf6N2E2_3678	0.67	+0.5
4,287,353	-		Pf6N2E2_3678	0.67	-1.1
4,287,353	-		Pf6N2E2_3678	0.67	+0.5
4,287,472	+		Pf6N2E2_3678	0.86	+0.5
4,287,472	+		Pf6N2E2_3678	0.86	+0.5
4,287,473	-		Pf6N2E2_3678	0.86	+0.5
4,287,487	+		Pf6N2E2_3678	0.88	+0.5
4,287,488	-		Pf6N2E2_3678	0.88	+0.5
4,287,499	+		Pf6N2E2_3678	0.90	-2.5
4,287,523	+				-0.3
4,287,523	+				-0.5
4,287,523	+				+0.5
4,287,524	-				+0.5
4,287,635	+				-1.1
4,287,635	+				+0.5
4,287,641	+				+0.5
4,287,641	+				-0.5
4,287,641	+				-0.5
4,287,642	-				-1.5
4,287,642	-				-1.1
4,287,923	-		Pf6N2E2_3679	0.26	+0.5
4,288,256	-		Pf6N2E2_3679	0.66	-1.1
4,288,258	+		Pf6N2E2_3679	0.66	+0.5
4,288,258	+		Pf6N2E2_3679	0.66	-0.5
4,288,303	+		Pf6N2E2_3679	0.72	-0.8
4,288,303	+		Pf6N2E2_3679	0.72	-0.5
4,288,304	-		Pf6N2E2_3679	0.72	+0.5
4,288,304	-		Pf6N2E2_3679	0.72	-2.1
4,288,304	-		Pf6N2E2_3679	0.72	-0.5
4,288,364	-		Pf6N2E2_3679	0.79	+0.5
4,288,402	+		Pf6N2E2_3679	0.83	+0.5
4,288,403	-		Pf6N2E2_3679	0.83	-2.1
4,288,498	-				-0.5
4,288,570	-				-2.1
4,288,645	+				+0.5
4,288,646	-				-0.5
4,288,646	-				-1.1
4,289,028	+		Pf6N2E2_3680	0.59	-0.5
4,289,028	+		Pf6N2E2_3680	0.59	-0.5
4,289,028	+		Pf6N2E2_3680	0.59	+0.9
4,289,029	-		Pf6N2E2_3680	0.59	-0.5
4,289,029	-		Pf6N2E2_3680	0.59	+0.5
4,289,160	+		Pf6N2E2_3680	0.78	-1.8
4,289,160	+		Pf6N2E2_3680	0.78	+0.5
4,289,160	+		Pf6N2E2_3680	0.78	-1.5
4,289,161	-		Pf6N2E2_3680	0.78	-0.5
4,289,161	-		Pf6N2E2_3680	0.78	-0.5
4,289,161	-		Pf6N2E2_3680	0.78	-1.1
4,289,161	-		Pf6N2E2_3680	0.78	-1.1
4,289,161	-		Pf6N2E2_3680	0.78	+0.5
4,289,161	-		Pf6N2E2_3680	0.78	-1.1
4,289,164	+		Pf6N2E2_3680	0.79	+0.5
4,289,164	+		Pf6N2E2_3680	0.79	-0.5
4,289,165	-		Pf6N2E2_3680	0.79	+0.5
4,289,165	-		Pf6N2E2_3680	0.79	-0.5
4,289,165	-		Pf6N2E2_3680	0.79	+0.5
4,289,289	+				-1.5
4,289,290	-				-0.3
4,289,290	-				-0.7
4,289,290	-				-0.5