Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3442

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
4,011,017	+		Pf6N2E2_3441	0.56	+0.4
4,011,065	+		Pf6N2E2_3441	0.59	-0.6
4,011,065	+		Pf6N2E2_3441	0.59	-0.9
4,011,447	-		Pf6N2E2_3441	0.87	+0.4
4,011,447	-		Pf6N2E2_3441	0.87	-0.6
4,011,447	-		Pf6N2E2_3441	0.87	-1.9
4,011,447	-		Pf6N2E2_3441	0.87	-1.1
4,011,620	+				-0.6
4,011,621	-				-1.7
4,011,621	-				-0.4
4,011,661	+				-1.1
4,011,701	-				+0.2
4,011,944	+				-0.6
4,011,944	+				+0.4
4,011,945	-				-0.6
4,011,945	-				-0.4
4,012,038	+				-1.9
4,012,039	-				-1.1
4,012,039	-				-0.6
4,012,190	+		Pf6N2E2_3443	0.17	-2.6
4,012,190	+		Pf6N2E2_3443	0.17	+0.4
4,012,191	-		Pf6N2E2_3443	0.17	+0.7
4,012,382	+		Pf6N2E2_3443	0.30	-0.6
4,012,382	+		Pf6N2E2_3443	0.30	-0.5
4,012,383	-		Pf6N2E2_3443	0.30	-0.6
4,012,383	-		Pf6N2E2_3443	0.30	+0.4
4,012,431	+		Pf6N2E2_3443	0.33	+0.4
4,012,497	-		Pf6N2E2_3443	0.38	+0.4