Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3414

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
3,956,118	-		Pf6N2E2_3413	0.29	+0.4
3,956,234	+		Pf6N2E2_3413	0.41	-0.6
3,956,235	-		Pf6N2E2_3413	0.42	+0.4
3,956,235	-		Pf6N2E2_3413	0.42	+0.4
3,956,235	-		Pf6N2E2_3413	0.42	+1.0
3,956,235	-		Pf6N2E2_3413	0.42	-0.1
3,956,235	-		Pf6N2E2_3413	0.42	+0.4
3,956,235	-		Pf6N2E2_3413	0.42	+0.4
3,956,235	-		Pf6N2E2_3413	0.42	-1.4
3,956,235	-		Pf6N2E2_3413	0.42	+0.8
3,956,235	-		Pf6N2E2_3413	0.42	-0.6
3,956,355	+		Pf6N2E2_3413	0.54	-1.0
3,956,355	+		Pf6N2E2_3413	0.54	+0.1
3,956,547	+		Pf6N2E2_3413	0.74	-0.6
3,956,547	+		Pf6N2E2_3413	0.74	+0.4
3,956,547	+		Pf6N2E2_3413	0.74	+0.4
3,956,547	+		Pf6N2E2_3413	0.74	-0.3
3,956,548	-		Pf6N2E2_3413	0.75	-0.6
3,956,548	-		Pf6N2E2_3413	0.75	+0.4
3,956,548	-		Pf6N2E2_3413	0.75	-2.1
3,956,548	-		Pf6N2E2_3413	0.75	-0.5
3,956,548	-		Pf6N2E2_3413	0.75	+0.4
3,956,548	-		Pf6N2E2_3413	0.75	+0.4
3,956,548	-		Pf6N2E2_3413	0.75	+0.4
3,956,548	-		Pf6N2E2_3413	0.75	-0.6
3,956,548	-		Pf6N2E2_3413	0.75	+1.4
3,956,707	-				-1.0
3,956,707	-				-0.1
3,956,786	+				+0.4
3,956,786	+				+0.4
3,956,786	+				+0.4
3,956,786	+				+0.4
3,956,791	-				+0.4
3,956,855	+				+0.4
3,956,855	+				+0.4
3,956,855	+				+0.4
3,956,871	+				+0.4
3,956,871	+				+0.4
3,956,871	+				+0.4
3,956,871	+				+0.4
3,956,872	-				+0.4
3,956,910	+				+0.4
3,956,911	-				+0.4
3,956,911	-				+0.4
3,956,943	+				-1.1
3,956,944	-				-0.6
3,956,993	+				+0.4
3,956,993	+				-0.6
3,956,993	+				+1.4
3,956,994	-				-0.6
3,956,994	-				-0.5
3,957,130	+				-0.4
3,957,131	-				-1.9
3,957,131	-				-1.6
3,957,181	+		Pf6N2E2_3414	0.11	+0.4
3,957,182	-		Pf6N2E2_3414	0.11	-0.2
3,957,182	-		Pf6N2E2_3414	0.11	+0.4
3,957,251	+		Pf6N2E2_3414	0.14	+0.4
3,957,251	+		Pf6N2E2_3414	0.14	+0.9
3,957,251	+		Pf6N2E2_3414	0.14	+0.4
3,957,251	+		Pf6N2E2_3414	0.14	-2.1
3,957,251	+		Pf6N2E2_3414	0.14	+0.4
3,957,251	+		Pf6N2E2_3414	0.14	-0.3
3,957,252	-		Pf6N2E2_3414	0.14	+0.4
3,957,252	-		Pf6N2E2_3414	0.14	+0.4
3,957,252	-		Pf6N2E2_3414	0.14	+0.4
3,957,297	-		Pf6N2E2_3414	0.16	-1.0
3,957,297	-		Pf6N2E2_3414	0.16	-0.7
3,957,311	-		Pf6N2E2_3414	0.17	-0.8
3,957,494	+		Pf6N2E2_3414	0.25	-0.6
3,957,518	+		Pf6N2E2_3414	0.26	-2.1
3,957,522	-		Pf6N2E2_3414	0.26	+0.4
3,957,522	-		Pf6N2E2_3414	0.26	-1.0
3,957,545	+		Pf6N2E2_3414	0.27	-0.6
3,957,545	+		Pf6N2E2_3414	0.27	-1.6
3,957,546	-		Pf6N2E2_3414	0.27	-1.9
3,957,546	-		Pf6N2E2_3414	0.27	+0.4
3,957,578	+		Pf6N2E2_3414	0.28	+0.4
3,957,635	+		Pf6N2E2_3414	0.30	-1.2
3,957,635	+		Pf6N2E2_3414	0.30	-0.6
3,957,635	+		Pf6N2E2_3414	0.30	-0.6
3,957,636	-		Pf6N2E2_3414	0.31	+0.4
3,957,651	+		Pf6N2E2_3414	0.31	-1.1
3,957,651	+		Pf6N2E2_3414	0.31	-0.6
3,957,651	+		Pf6N2E2_3414	0.31	+0.4
3,957,652	-		Pf6N2E2_3414	0.31	-0.2
3,957,652	-		Pf6N2E2_3414	0.31	+0.4
3,957,654	+		Pf6N2E2_3414	0.31	+0.4
3,957,654	+		Pf6N2E2_3414	0.31	+0.4
3,957,654	+		Pf6N2E2_3414	0.31	-0.6
3,957,654	+		Pf6N2E2_3414	0.31	+0.4
3,957,655	-		Pf6N2E2_3414	0.31	+0.4
3,957,752	+		Pf6N2E2_3414	0.35	-0.4
3,957,752	+		Pf6N2E2_3414	0.35	+0.4
3,957,752	+		Pf6N2E2_3414	0.35	+0.6
3,957,753	-		Pf6N2E2_3414	0.35	-1.1
3,957,753	-		Pf6N2E2_3414	0.35	+0.4
3,957,753	-		Pf6N2E2_3414	0.35	+0.4
3,957,762	-		Pf6N2E2_3414	0.36	-1.7
3,957,762	-		Pf6N2E2_3414	0.36	-1.6
3,957,762	-		Pf6N2E2_3414	0.36	+0.3
3,957,762	-		Pf6N2E2_3414	0.36	+0.4
3,957,872	+		Pf6N2E2_3414	0.40	+0.4
3,957,873	-		Pf6N2E2_3414	0.40	-1.9
3,957,895	+		Pf6N2E2_3414	0.41	+0.4
3,957,895	+		Pf6N2E2_3414	0.41	+0.4
3,957,895	+		Pf6N2E2_3414	0.41	-0.2
3,957,895	+		Pf6N2E2_3414	0.41	+0.4
3,957,896	-		Pf6N2E2_3414	0.41	-1.1
3,957,896	-		Pf6N2E2_3414	0.41	-0.6
3,957,896	-		Pf6N2E2_3414	0.41	+0.4
3,957,963	-		Pf6N2E2_3414	0.44	-0.6
3,957,963	-		Pf6N2E2_3414	0.44	-0.6
3,958,016	+		Pf6N2E2_3414	0.47	+0.4
3,958,017	-		Pf6N2E2_3414	0.47	+0.4
3,958,035	-		Pf6N2E2_3414	0.47	-0.6
3,958,035	-		Pf6N2E2_3414	0.47	-0.1
3,958,050	-		Pf6N2E2_3414	0.48	+0.4
3,958,050	-		Pf6N2E2_3414	0.48	+0.4
3,958,050	-		Pf6N2E2_3414	0.48	-1.1
3,958,050	-		Pf6N2E2_3414	0.48	-0.3
3,958,073	-		Pf6N2E2_3414	0.49	+0.4
3,958,073	-		Pf6N2E2_3414	0.49	-1.4
3,958,073	-		Pf6N2E2_3414	0.49	-1.1
3,958,167	-		Pf6N2E2_3414	0.53	+0.4
3,958,170	+		Pf6N2E2_3414	0.53	-0.6
3,958,170	+		Pf6N2E2_3414	0.53	-0.4
3,958,171	-		Pf6N2E2_3414	0.53	-0.6
3,958,171	-		Pf6N2E2_3414	0.53	+0.4
3,958,171	-		Pf6N2E2_3414	0.53	-0.4
3,958,171	-		Pf6N2E2_3414	0.53	+0.4
3,958,171	-		Pf6N2E2_3414	0.53	+0.4
3,958,171	-		Pf6N2E2_3414	0.53	-0.6
3,958,171	-		Pf6N2E2_3414	0.53	+0.1
3,958,171	-		Pf6N2E2_3414	0.53	+0.4
3,958,171	-		Pf6N2E2_3414	0.53	-1.1
3,958,171	-		Pf6N2E2_3414	0.53	-0.3
3,958,217	+		Pf6N2E2_3414	0.55	+0.4
3,958,217	+		Pf6N2E2_3414	0.55	+0.4
3,958,217	+		Pf6N2E2_3414	0.55	+0.8
3,958,218	-		Pf6N2E2_3414	0.55	-1.1
3,958,218	-		Pf6N2E2_3414	0.55	+0.4
3,958,218	-		Pf6N2E2_3414	0.55	+0.4
3,958,219	+		Pf6N2E2_3414	0.55	-1.1
3,958,219	+		Pf6N2E2_3414	0.55	+0.4
3,958,219	+		Pf6N2E2_3414	0.55	-0.7
3,958,219	+		Pf6N2E2_3414	0.55	-1.6
3,958,219	+		Pf6N2E2_3414	0.55	-0.6
3,958,220	-				+0.4
3,958,220	-		Pf6N2E2_3414	0.55	+0.4
3,958,220	-		Pf6N2E2_3414	0.55	-0.9
3,958,220	-		Pf6N2E2_3414	0.55	-0.6
3,958,274	+		Pf6N2E2_3414	0.57	+0.4
3,958,275	-		Pf6N2E2_3414	0.57	+0.4
3,958,306	+		Pf6N2E2_3414	0.59	+0.4
3,958,306	+		Pf6N2E2_3414	0.59	+0.4
3,958,306	+		Pf6N2E2_3414	0.59	+0.4
3,958,306	+		Pf6N2E2_3414	0.59	+0.4
3,958,307	-		Pf6N2E2_3414	0.59	+0.4
3,958,307	-		Pf6N2E2_3414	0.59	+0.4
3,958,307	-		Pf6N2E2_3414	0.59	+0.4
3,958,307	-		Pf6N2E2_3414	0.59	+0.1
3,958,307	-		Pf6N2E2_3414	0.59	+0.4
3,958,326	-		Pf6N2E2_3414	0.60	-1.1
3,958,359	-		Pf6N2E2_3414	0.61	-0.8
3,958,427	+		Pf6N2E2_3414	0.64	-0.6
3,958,429	+		Pf6N2E2_3414	0.64	-1.9
3,958,430	-		Pf6N2E2_3414	0.64	+0.4
3,958,490	+		Pf6N2E2_3414	0.66	+0.4
3,958,490	+		Pf6N2E2_3414	0.66	-1.1
3,958,490	+		Pf6N2E2_3414	0.66	-1.6
3,958,491	-		Pf6N2E2_3414	0.67	-0.7
3,958,491	-		Pf6N2E2_3414	0.67	+0.4
3,958,491	-		Pf6N2E2_3414	0.67	+0.4
3,958,491	-		Pf6N2E2_3414	0.67	-0.6
3,958,491	-		Pf6N2E2_3414	0.67	+0.4
3,958,491	-		Pf6N2E2_3414	0.67	+0.1
3,958,491	-		Pf6N2E2_3414	0.67	+0.4
3,958,501	+		Pf6N2E2_3414	0.67	+0.4
3,958,501	+		Pf6N2E2_3414	0.67	-0.6
3,958,563	+		Pf6N2E2_3414	0.70	+1.0
3,958,564	-		Pf6N2E2_3414	0.70	-0.6
3,958,564	-		Pf6N2E2_3414	0.70	-0.6
3,958,576	+		Pf6N2E2_3414	0.70	-0.6
3,958,577	-		Pf6N2E2_3414	0.70	-0.6
3,958,613	+		Pf6N2E2_3414	0.72	+0.4
3,958,613	+		Pf6N2E2_3414	0.72	-0.2
3,958,613	+		Pf6N2E2_3414	0.72	+0.4
3,958,613	+		Pf6N2E2_3414	0.72	-0.6
3,958,613	+		Pf6N2E2_3414	0.72	-2.1
3,958,613	+		Pf6N2E2_3414	0.72	+0.4
3,958,613	+		Pf6N2E2_3414	0.72	-0.6
3,958,614	-		Pf6N2E2_3414	0.72	+0.4
3,958,640	+		Pf6N2E2_3414	0.73	+0.4
3,958,640	+		Pf6N2E2_3414	0.73	-1.9
3,958,640	+		Pf6N2E2_3414	0.73	-0.3
3,958,640	+		Pf6N2E2_3414	0.73	+0.4
3,958,641	-		Pf6N2E2_3414	0.73	-0.6
3,958,641	-		Pf6N2E2_3414	0.73	-0.7
3,958,641	-		Pf6N2E2_3414	0.73	+0.4
3,958,641	-		Pf6N2E2_3414	0.73	-0.8
3,958,641	-		Pf6N2E2_3414	0.73	+0.4
3,958,683	+		Pf6N2E2_3414	0.75	-1.1
3,958,683	+		Pf6N2E2_3414	0.75	+0.4
3,958,684	-		Pf6N2E2_3414	0.75	+0.2
3,958,706	+		Pf6N2E2_3414	0.76	-0.6
3,958,706	+		Pf6N2E2_3414	0.76	-1.6
3,958,725	-		Pf6N2E2_3414	0.76	+0.4
3,958,725	-		Pf6N2E2_3414	0.76	-0.7
3,958,913	+		Pf6N2E2_3414	0.84	+0.4
3,958,913	+		Pf6N2E2_3414	0.84	-0.6
3,958,919	+		Pf6N2E2_3414	0.85	-0.6
3,958,919	+		Pf6N2E2_3414	0.85	+0.4
3,958,919	+		Pf6N2E2_3414	0.85	+0.4
3,958,919	+		Pf6N2E2_3414	0.85	+0.4
3,958,919	+		Pf6N2E2_3414	0.85	-1.1
3,958,920	-		Pf6N2E2_3414	0.85	+0.1
3,958,920	-		Pf6N2E2_3414	0.85	-0.6
3,958,952	+		Pf6N2E2_3414	0.86	+0.4
3,958,953	-		Pf6N2E2_3414	0.86	-0.6
3,958,953	-		Pf6N2E2_3414	0.86	+0.4
3,959,021	+		Pf6N2E2_3414	0.89	-1.0
3,959,021	+		Pf6N2E2_3414	0.89	-0.8
3,959,021	+		Pf6N2E2_3414	0.89	-0.6
3,959,021	+		Pf6N2E2_3414	0.89	-0.6
3,959,022	-		Pf6N2E2_3414	0.89	-1.1
3,959,022	-		Pf6N2E2_3414	0.89	-0.6
3,959,024	+		Pf6N2E2_3414	0.89	+0.4
3,959,024	+		Pf6N2E2_3414	0.89	+0.4
3,959,024	+		Pf6N2E2_3414	0.89	-0.1
3,959,024	+		Pf6N2E2_3414	0.89	-0.6
3,959,024	+		Pf6N2E2_3414	0.89	-0.9
3,959,024	+		Pf6N2E2_3414	0.89	-0.6
3,959,024	+		Pf6N2E2_3414	0.89	-0.6
3,959,025	-		Pf6N2E2_3414	0.89	-0.6
3,959,025	-		Pf6N2E2_3414	0.89	-0.7
3,959,025	-		Pf6N2E2_3414	0.89	+0.4
3,959,025	-		Pf6N2E2_3414	0.89	+0.4
3,959,025	-		Pf6N2E2_3414	0.89	-1.1
3,959,025	-		Pf6N2E2_3414	0.89	+0.4
3,959,069	+				-1.1
3,959,069	+				-0.2
3,959,082	-				+0.4
3,959,147	+				+0.4
3,959,147	+				-0.6
3,959,147	+				-2.1
3,959,147	+				+0.4
3,959,148	-				+0.4
3,959,148	-				+0.4
3,959,189	-				+0.4
3,959,189	-				+0.4
3,959,235	-				+0.4
3,959,235	-				-2.1
3,959,235	-				-0.6
3,959,235	-				-0.6
3,959,237	+				-0.6
3,959,237	+				-1.1
3,959,274	-				+0.4
3,959,274	-				-0.6
3,959,274	-				-0.4
3,959,282	+				-3.5
3,959,383	+				-0.6
3,959,383	+				-0.6
3,959,383	+				-0.6
3,959,383	+				-0.6
3,959,384	-				+0.4
3,959,384	-				-0.4
3,959,384	-				+0.4
3,959,442	+				-0.6
3,959,639	+		Pf6N2E2_3415	0.16	-1.6
3,959,639	+		Pf6N2E2_3415	0.16	-0.6
3,959,710	+		Pf6N2E2_3415	0.20	+0.4
3,959,711	-		Pf6N2E2_3415	0.21	-1.0
3,959,901	+		Pf6N2E2_3415	0.33	+0.4
3,959,901	+		Pf6N2E2_3415	0.33	+0.4
3,959,902	-		Pf6N2E2_3415	0.33	-0.8
3,959,902	-		Pf6N2E2_3415	0.33	+0.4
3,959,902	-		Pf6N2E2_3415	0.33	+0.4
3,959,902	-		Pf6N2E2_3415	0.33	+0.4
3,959,902	-		Pf6N2E2_3415	0.33	-1.1
3,959,902	-		Pf6N2E2_3415	0.33	-0.6
3,960,056	+		Pf6N2E2_3415	0.44	-0.6
3,960,056	+		Pf6N2E2_3415	0.44	+0.4
3,960,056	+		Pf6N2E2_3415	0.44	+0.4
3,960,057	-		Pf6N2E2_3415	0.44	+0.4
3,960,057	-		Pf6N2E2_3415	0.44	+0.4
3,960,057	-		Pf6N2E2_3415	0.44	-2.1
3,960,057	-		Pf6N2E2_3415	0.44	-1.0
3,960,125	+		Pf6N2E2_3415	0.48	-1.4
3,960,238	+		Pf6N2E2_3415	0.56	+0.4
3,960,238	+		Pf6N2E2_3415	0.56	+0.4
3,960,238	+		Pf6N2E2_3415	0.56	+0.4
3,960,238	+		Pf6N2E2_3415	0.56	-0.6
3,960,239	-		Pf6N2E2_3415	0.56	-0.5
3,960,239	-		Pf6N2E2_3415	0.56	+0.4