Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2776

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
3,263,548	+		Pf6N2E2_2775	0.10	+0.4
3,263,548	+		Pf6N2E2_2775	0.10	-1.2
3,263,548	+		Pf6N2E2_2775	0.10	-1.2
3,263,549	-		Pf6N2E2_2775	0.10	-1.2
3,263,549	-		Pf6N2E2_2775	0.10	-0.6
3,263,549	-		Pf6N2E2_2775	0.10	+0.4
3,263,572	+		Pf6N2E2_2775	0.12	+0.4
3,263,614	+		Pf6N2E2_2775	0.16	-1.1
3,263,650	+		Pf6N2E2_2775	0.20	-0.4
3,263,671	+		Pf6N2E2_2775	0.22	+0.4
3,263,672	-		Pf6N2E2_2775	0.22	+0.4
3,263,672	-		Pf6N2E2_2775	0.22	+0.4
3,263,672	-		Pf6N2E2_2775	0.22	-0.6
3,263,875	+		Pf6N2E2_2775	0.41	-1.9
3,263,875	+		Pf6N2E2_2775	0.41	+0.4
3,263,876	-		Pf6N2E2_2775	0.41	+0.4
3,263,876	-		Pf6N2E2_2775	0.41	-1.9
3,263,937	+		Pf6N2E2_2775	0.47	+0.4
3,263,937	+		Pf6N2E2_2775	0.47	-0.6
3,264,475	+				-0.1
3,264,475	+				+0.4
3,264,475	+				+1.0
3,264,475	+				-0.9
3,264,479	+				+0.4
3,264,479	+				+0.4
3,264,480	-				+0.5
3,264,480	-				-0.6
3,264,480	-				+0.4
3,264,480	-				-0.6
3,264,563	+				+0.4
3,264,563	+				-0.6
3,264,563	+				-0.6
3,264,563	+				+0.4
3,264,727	+		Pf6N2E2_2776	0.25	-0.6
3,264,727	+		Pf6N2E2_2776	0.25	+1.1
3,264,728	-		Pf6N2E2_2776	0.25	+0.4
3,264,728	-		Pf6N2E2_2776	0.25	+0.4
3,265,127	+		Pf6N2E2_2776	0.74	-0.6
3,265,127	+		Pf6N2E2_2776	0.74	+0.4
3,265,127	+		Pf6N2E2_2776	0.74	+0.4
3,265,127	+		Pf6N2E2_2776	0.74	+1.1
3,265,127	+		Pf6N2E2_2776	0.74	+0.4
3,265,127	+		Pf6N2E2_2776	0.74	+0.4
3,265,128	-		Pf6N2E2_2776	0.74	-0.6
3,265,214	-		Pf6N2E2_2776	0.85	+0.3
3,265,241	-		Pf6N2E2_2776	0.88	+0.4
3,265,318	+				+0.4
3,265,319	-				+0.4
3,265,319	-				+0.4
3,265,371	+				-0.8
3,265,371	+				-0.6
3,265,371	+				-1.2
3,265,579	-		Pf6N2E2_2777	0.31	+0.1
3,265,705	+		Pf6N2E2_2777	0.47	-0.6
3,265,705	+		Pf6N2E2_2777	0.47	+0.4
3,265,706	-		Pf6N2E2_2777	0.47	+0.4
3,265,706	-		Pf6N2E2_2777	0.47	+0.4
3,265,706	-		Pf6N2E2_2777	0.47	-0.6
3,265,739	+		Pf6N2E2_2777	0.51	-0.6
3,265,740	-		Pf6N2E2_2777	0.51	-0.4
3,265,743	+		Pf6N2E2_2777	0.52	+0.4
3,265,744	-		Pf6N2E2_2777	0.52	-0.6
3,265,744	-		Pf6N2E2_2777	0.52	-1.0
3,266,014	-		Pf6N2E2_2777	0.86	-0.6
3,266,031	+		Pf6N2E2_2777	0.88	+0.4
3,266,031	+		Pf6N2E2_2777	0.88	-1.4
3,266,031	+		Pf6N2E2_2777	0.88	+0.4
3,266,032	-		Pf6N2E2_2777	0.88	+0.4
3,266,032	-		Pf6N2E2_2777	0.88	+0.4
3,266,032	-		Pf6N2E2_2777	0.88	+0.4
3,266,032	-		Pf6N2E2_2777	0.88	-0.7
3,266,032	-		Pf6N2E2_2777	0.88	-0.7
3,266,114	+				-2.4
3,266,159	+				+0.4
3,266,275	+		Pf6N2E2_2778	0.19	+0.4