Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2585

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
3,041,515	+		Pf6N2E2_2583	0.88	+0.4
3,041,639	-				-0.6
3,041,639	-				-4.0
3,041,647	-				+0.3
3,041,870	+		Pf6N2E2_2584	0.46	+0.3
3,041,887	+		Pf6N2E2_2584	0.50	+0.3
3,041,887	+		Pf6N2E2_2584	0.50	-1.1
3,041,887	+		Pf6N2E2_2584	0.50	+0.3
3,041,887	+		Pf6N2E2_2584	0.50	-1.2
3,041,888	-		Pf6N2E2_2584	0.50	+0.3
3,041,888	-		Pf6N2E2_2584	0.50	-1.2
3,041,888	-		Pf6N2E2_2584	0.50	+0.3
3,041,888	-		Pf6N2E2_2584	0.50	+0.3
3,041,911	+		Pf6N2E2_2584	0.54	+0.3
3,041,911	+		Pf6N2E2_2584	0.54	+2.2
3,041,911	+		Pf6N2E2_2584	0.54	+1.9
3,041,912	-		Pf6N2E2_2584	0.55	-0.4
3,041,912	-		Pf6N2E2_2584	0.55	-0.7
3,041,912	-		Pf6N2E2_2584	0.55	-0.5
3,041,912	-		Pf6N2E2_2584	0.55	-1.2
3,041,912	-		Pf6N2E2_2584	0.55	+0.2
3,041,912	-		Pf6N2E2_2584	0.55	-0.7
3,042,019	+		Pf6N2E2_2584	0.76	+1.2
3,042,019	+		Pf6N2E2_2584	0.76	-0.7
3,042,040	-		Pf6N2E2_2584	0.80	-0.7
3,042,040	-		Pf6N2E2_2584	0.80	+0.3
3,042,040	-		Pf6N2E2_2584	0.80	-0.7
3,042,114	+				+0.3
3,042,114	+				-1.2
3,042,146	+				+1.2
3,042,147	-				+0.3
3,042,157	+				+0.3
3,042,201	+				-1.2
3,042,304	+				+0.3
3,042,305	-				+0.3
3,042,315	+				-2.0
3,042,315	+				+0.3
3,042,315	+				-0.7
3,042,315	+				+0.3
3,042,380	+				+0.3
3,042,380	+				+0.3
3,042,380	+				-0.7
3,042,381	-				-0.7
3,042,381	-				+0.7
3,042,383	+				+0.3
3,042,384	-				+1.3
3,042,417	+				+0.3
3,042,773	+		Pf6N2E2_2585	0.29	+1.1
3,042,773	+		Pf6N2E2_2585	0.29	+0.9
3,042,773	+		Pf6N2E2_2585	0.29	+1.1
3,042,773	+		Pf6N2E2_2585	0.29	+0.3
3,042,773	+		Pf6N2E2_2585	0.29	+0.9
3,042,773	+		Pf6N2E2_2585	0.29	-0.7
3,042,773	+		Pf6N2E2_2585	0.29	+0.3
3,042,774	-		Pf6N2E2_2585	0.29	+1.1
3,042,774	-		Pf6N2E2_2585	0.29	+1.2
3,042,774	-		Pf6N2E2_2585	0.29	+0.2
3,042,774	-		Pf6N2E2_2585	0.29	+0.3
3,042,774	-		Pf6N2E2_2585	0.29	+0.3
3,042,774	-		Pf6N2E2_2585	0.29	+0.5
3,042,774	-		Pf6N2E2_2585	0.29	+0.3
3,042,774	-		Pf6N2E2_2585	0.29	+1.3
3,042,774	-		Pf6N2E2_2585	0.29	+0.3
3,042,774	-		Pf6N2E2_2585	0.29	+1.2
3,042,774	-		Pf6N2E2_2585	0.29	+1.7
3,042,825	+		Pf6N2E2_2585	0.33	+0.3
3,042,826	-		Pf6N2E2_2585	0.33	-0.7
3,042,864	+		Pf6N2E2_2585	0.36	+0.3
3,042,865	-		Pf6N2E2_2585	0.36	-1.2
3,042,865	-		Pf6N2E2_2585	0.36	-0.7
3,043,549	-		Pf6N2E2_2585	0.86	+0.3
3,043,650	+				+0.3
3,043,728	+				-0.7
3,043,728	+				+0.3
3,043,729	-				+0.3
3,043,729	-				+0.3
3,043,729	-				+0.3
3,043,774	+				-2.2
3,043,775	-				-0.7
3,043,775	-				+0.3
3,043,775	-				+0.3
3,043,775	-				+0.3
3,043,779	-				-0.7
3,043,779	-				+0.3
3,043,881	+		Pf6N2E2_2586	0.13	+0.3
3,043,882	-		Pf6N2E2_2586	0.14	+0.3
3,044,018	-		Pf6N2E2_2586	0.53	-1.4
3,044,388	+		Pf6N2E2_2587	0.10	+0.3
3,044,388	+		Pf6N2E2_2587	0.10	-1.7
3,044,388	+		Pf6N2E2_2587	0.10	-0.7
3,044,443	+		Pf6N2E2_2587	0.14	+0.3
3,044,443	+		Pf6N2E2_2587	0.14	-0.7
3,044,444	-		Pf6N2E2_2587	0.14	+0.3
3,044,444	-		Pf6N2E2_2587	0.14	-1.0
3,044,485	+		Pf6N2E2_2587	0.16	+0.3
3,044,485	+		Pf6N2E2_2587	0.16	-1.0
3,044,485	+		Pf6N2E2_2587	0.16	+0.3
3,044,486	-		Pf6N2E2_2587	0.16	-0.7
3,044,486	-		Pf6N2E2_2587	0.16	+0.3
3,044,489	-		Pf6N2E2_2587	0.16	+0.3
3,044,489	-		Pf6N2E2_2587	0.16	-0.4
3,044,563	+		Pf6N2E2_2587	0.21	-1.6
3,044,564	-		Pf6N2E2_2587	0.21	+0.3
3,044,564	-		Pf6N2E2_2587	0.21	+0.3
3,044,564	-		Pf6N2E2_2587	0.21	+0.3
3,044,584	+		Pf6N2E2_2587	0.22	-1.8
3,044,585	-		Pf6N2E2_2587	0.22	+0.3
3,044,585	-		Pf6N2E2_2587	0.22	+0.3
3,044,625	+		Pf6N2E2_2587	0.24	+0.3
3,044,626	-		Pf6N2E2_2587	0.24	+1.7
3,044,626	-		Pf6N2E2_2587	0.24	-1.4
3,044,626	-		Pf6N2E2_2587	0.24	+0.3
3,044,641	+		Pf6N2E2_2587	0.25	-0.7
3,044,641	+		Pf6N2E2_2587	0.25	-0.7
3,044,641	+		Pf6N2E2_2587	0.25	-1.5
3,044,641	+		Pf6N2E2_2587	0.25	-0.7
3,044,641	+		Pf6N2E2_2587	0.25	-1.1
3,044,642	-		Pf6N2E2_2587	0.25	+0.3