Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1784

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
2,108,221	-				+0.2
2,108,339	-				-1.6
2,108,631	+		Pf6N2E2_1782	0.81	+0.2
2,108,632	-		Pf6N2E2_1782	0.81	+0.8
2,108,632	-		Pf6N2E2_1782	0.81	-1.3
2,108,632	-		Pf6N2E2_1782	0.81	+0.2
2,108,727	-				+0.2
2,108,873	+		Pf6N2E2_1783	0.40	+0.2
2,108,942	-		Pf6N2E2_1783	0.59	+0.2
2,108,942	-		Pf6N2E2_1783	0.59	-0.8
2,109,107	-				+0.2
2,109,131	+				+0.2
2,109,131	+				+0.3
2,109,132	-				+0.2
2,109,132	-				-0.5
2,109,184	+				+0.2
2,109,184	+				-0.2
2,109,185	-				-1.2
2,109,765	+		Pf6N2E2_1784	0.59	+0.2
2,109,766	-		Pf6N2E2_1784	0.59	+0.2
2,110,008	+		Pf6N2E2_1784	0.81	-1.8
2,110,111	-		Pf6N2E2_1784	0.90	-0.8
2,110,417	-				+0.2
2,110,417	-				+0.2
2,110,422	+				-0.8
2,110,423	-				+0.2
2,110,423	-				-0.7
2,110,423	-				+0.2
2,110,516	-				-0.8
2,110,661	+				-0.8
2,110,661	+				+0.2
2,110,662	-				+0.2
2,110,662	-				+0.2
2,110,700	-		Pf6N2E2_1785	0.13	-1.3
2,110,729	+		Pf6N2E2_1785	0.15	-0.8
2,110,729	+		Pf6N2E2_1785	0.15	+0.2
2,110,798	+		Pf6N2E2_1785	0.21	-0.8
2,110,799	-		Pf6N2E2_1785	0.21	-0.8
2,110,802	+		Pf6N2E2_1785	0.21	-0.8
2,110,802	+		Pf6N2E2_1785	0.21	+0.2
2,110,803	-		Pf6N2E2_1785	0.21	-0.8
2,110,803	-		Pf6N2E2_1785	0.21	-0.6
2,110,803	-		Pf6N2E2_1785	0.21	+0.2
2,110,803	-		Pf6N2E2_1785	0.21	+0.2
2,110,803	-		Pf6N2E2_1785	0.21	+0.2
2,110,803	-		Pf6N2E2_1785	0.21	-0.4
2,110,803	-		Pf6N2E2_1785	0.21	+0.2
2,110,803	-		Pf6N2E2_1785	0.21	+0.6
2,110,930	+		Pf6N2E2_1785	0.31	-0.8
2,110,931	-		Pf6N2E2_1785	0.32	-2.1
2,110,983	+		Pf6N2E2_1785	0.36	+0.2
2,110,983	+		Pf6N2E2_1785	0.36	+0.2
2,110,984	-		Pf6N2E2_1785	0.36	-0.8
2,110,984	-		Pf6N2E2_1785	0.36	-1.8
2,110,984	-		Pf6N2E2_1785	0.36	+0.2
2,110,984	-		Pf6N2E2_1785	0.36	+0.2
2,110,984	-		Pf6N2E2_1785	0.36	-0.2
2,110,989	-		Pf6N2E2_1785	0.36	+0.2
2,110,989	-		Pf6N2E2_1785	0.36	-1.3
2,111,059	+		Pf6N2E2_1785	0.42	+0.2
2,111,060	-		Pf6N2E2_1785	0.42	-0.8
2,111,215	-		Pf6N2E2_1785	0.54	+0.2