Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1379

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
1,616,764	+		Pf6N2E2_1378	0.48	-0.8
1,616,764	+		Pf6N2E2_1378	0.48	-0.8
1,616,765	-		Pf6N2E2_1378	0.48	+0.2
1,616,765	-		Pf6N2E2_1378	0.48	+0.2
1,617,115	+		Pf6N2E2_1378	0.77	-0.8
1,617,115	+		Pf6N2E2_1378	0.77	-1.3
1,617,116	-		Pf6N2E2_1378	0.77	+0.2
1,617,116	-		Pf6N2E2_1378	0.77	-0.9
1,617,168	-		Pf6N2E2_1378	0.82	+0.2
1,617,187	+		Pf6N2E2_1378	0.83	+0.2
1,617,351	+				-1.3
1,617,351	+				-0.3
1,617,393	+				-2.1
1,617,393	+				-0.8
1,617,394	-				+0.2
1,617,394	-				-0.8
1,618,083	-		Pf6N2E2_1379	0.37	-1.3
1,618,256	+		Pf6N2E2_1379	0.50	+0.2
1,618,273	+		Pf6N2E2_1379	0.51	-0.8
1,618,274	-		Pf6N2E2_1379	0.51	-1.3
1,618,563	+		Pf6N2E2_1379	0.72	+0.2
1,618,563	+		Pf6N2E2_1379	0.72	-0.8
1,618,563	+		Pf6N2E2_1379	0.72	-0.8
1,618,563	+		Pf6N2E2_1379	0.72	-1.3
1,618,564	-		Pf6N2E2_1379	0.72	-1.3
1,618,645	+		Pf6N2E2_1379	0.78	+0.2
1,618,645	+		Pf6N2E2_1379	0.78	-1.8
1,619,205	-		Pf6N2E2_1380	0.23	+0.2
1,619,205	-		Pf6N2E2_1380	0.23	+0.2