Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5608

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
6,423,072	+				+0.4
6,423,072	+				-0.6
6,423,072	+				+0.4
6,423,144	+				-0.3
6,423,144	+				-1.2
6,423,328	+				-0.6
6,423,328	+				-1.6
6,423,329	-				+0.4
6,423,329	-				+0.4
6,423,365	+				+0.4
6,423,365	+				-0.6
6,423,365	+				+0.4
6,423,365	+				-0.6
6,423,365	+				+0.4
6,423,366	-				+0.4
6,423,366	-				-0.6
6,423,371	+				+0.4
6,423,371	+				-1.1
6,423,372	-				-0.6
6,423,632	+		Pf6N2E2_5608	0.44	+0.4
6,423,633	-		Pf6N2E2_5608	0.45	+0.4
6,423,633	-		Pf6N2E2_5608	0.45	+0.4
6,423,633	-		Pf6N2E2_5608	0.45	+0.4
6,423,820	+		Pf6N2E2_5608	0.70	+0.4
6,423,820	+		Pf6N2E2_5608	0.70	-0.6
6,423,820	+		Pf6N2E2_5608	0.70	-0.6
6,423,821	-		Pf6N2E2_5608	0.70	-0.6
6,423,885	+		Pf6N2E2_5608	0.78	-2.6
6,423,885	+		Pf6N2E2_5608	0.78	+0.4
6,423,886	-		Pf6N2E2_5608	0.79	-0.6
6,423,908	+		Pf6N2E2_5608	0.82	-1.2
6,423,953	-		Pf6N2E2_5608	0.88	-0.6
6,424,051	-				+0.4
6,424,183	+				-1.2
6,424,184	-				-0.6
6,424,214	+				+0.4
6,424,214	+				+0.4
6,424,240	+				-0.6
6,424,249	-				-1.5
6,424,273	+				-0.5
6,424,273	+				+0.4
6,424,274	-				-0.0
6,424,317	+				-0.6
6,424,318	-				-0.6
6,424,395	+		Pf6N2E2_5609	0.19	-0.0
6,424,395	+		Pf6N2E2_5609	0.19	-0.4
6,424,396	-		Pf6N2E2_5609	0.19	+0.4
6,424,396	-		Pf6N2E2_5609	0.19	-1.6
6,424,441	-		Pf6N2E2_5609	0.26	-0.6
6,424,481	+		Pf6N2E2_5609	0.32	-0.9
6,424,557	+		Pf6N2E2_5609	0.43	+0.4
6,424,557	+		Pf6N2E2_5609	0.43	-0.2
6,424,558	-		Pf6N2E2_5609	0.43	-0.8
6,424,558	-		Pf6N2E2_5609	0.43	+0.4
6,424,558	-		Pf6N2E2_5609	0.43	+0.4
6,424,558	-		Pf6N2E2_5609	0.43	-0.6
6,424,665	+		Pf6N2E2_5609	0.59	+0.4
6,424,665	+		Pf6N2E2_5609	0.59	+0.4
6,424,666	-		Pf6N2E2_5609	0.59	+0.1
6,424,666	-		Pf6N2E2_5609	0.59	+0.4
6,424,900	+				+0.4
6,424,900	+				+0.4
6,424,900	+				-0.6
6,424,900	+				-0.6
6,424,900	+				+0.4
6,424,900	+				-0.4
6,424,900	+				-0.4
6,424,900	+				-0.2
6,424,900	+				+0.4
6,424,900	+				-0.3
6,424,900	+				-1.9
6,424,900	+				-1.2
6,424,901	-				-0.1
6,424,901	-				-1.9
6,424,901	-				-1.2
6,424,901	-				+0.4
6,424,901	-				-1.2
6,424,945	-				-0.6