Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4718

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
5,454,233	+		Pf6N2E2_4717	0.25	-0.5
5,454,233	+		Pf6N2E2_4717	0.25	+0.5
5,454,234	-		Pf6N2E2_4717	0.25	+0.5
5,454,234	-		Pf6N2E2_4717	0.25	+0.5
5,454,236	-		Pf6N2E2_4717	0.25	-1.1
5,454,337	+		Pf6N2E2_4717	0.33	-1.1
5,454,337	+		Pf6N2E2_4717	0.33	-1.1
5,454,338	-		Pf6N2E2_4717	0.33	-1.9
5,454,352	+		Pf6N2E2_4717	0.34	+0.5
5,454,385	+		Pf6N2E2_4717	0.37	-0.5
5,454,452	-		Pf6N2E2_4717	0.42	-1.5
5,454,845	+		Pf6N2E2_4717	0.74	-1.5
5,454,845	+		Pf6N2E2_4717	0.74	-0.7
5,454,845	+		Pf6N2E2_4717	0.74	-0.5
5,454,845	+		Pf6N2E2_4717	0.74	+0.5
5,454,846	-		Pf6N2E2_4717	0.74	-0.5
5,454,846	-		Pf6N2E2_4717	0.74	-3.4
5,454,846	-		Pf6N2E2_4717	0.74	-1.3
5,454,846	-		Pf6N2E2_4717	0.74	-1.8
5,454,846	-		Pf6N2E2_4717	0.74	-1.5
5,455,136	+				-1.5
5,455,187	+				+0.5
5,455,187	+				-1.5
5,455,188	-				+0.5
5,455,194	+				-0.8
5,455,194	+				-0.5
5,455,194	+				-0.5
5,455,194	+				+0.5
5,455,195	-				-2.8
5,455,195	-				-1.1
5,455,195	-				-2.3
5,455,204	+				+0.5
5,455,269	+				+0.5
5,455,291	+				-0.5
5,455,339	+		Pf6N2E2_4718	0.12	-1.6
5,455,339	+		Pf6N2E2_4718	0.12	+0.5
5,455,339	+		Pf6N2E2_4718	0.12	+0.5
5,455,340	-		Pf6N2E2_4718	0.12	+0.5
5,455,444	+		Pf6N2E2_4718	0.20	-0.5
5,455,445	-		Pf6N2E2_4718	0.20	-0.5
5,455,445	-		Pf6N2E2_4718	0.20	+0.5
5,455,445	-		Pf6N2E2_4718	0.20	-0.5
5,455,471	+		Pf6N2E2_4718	0.22	-0.5
5,455,472	-		Pf6N2E2_4718	0.22	-0.5
5,455,520	-		Pf6N2E2_4718	0.26	-2.1
5,455,549	+		Pf6N2E2_4718	0.28	+0.5
5,455,622	+		Pf6N2E2_4718	0.34	+0.5
5,455,623	-		Pf6N2E2_4718	0.34	-1.5
5,456,041	+		Pf6N2E2_4718	0.68	-1.1
5,456,095	+		Pf6N2E2_4718	0.72	-2.1
5,456,443	+				-0.5
5,456,460	-				-1.8
5,456,460	-				-0.5
5,456,460	-				-1.1
5,456,586	+		Pf6N2E2_4719	0.38	-1.7
5,456,586	+		Pf6N2E2_4719	0.38	-0.5
5,456,586	+		Pf6N2E2_4719	0.38	+0.5
5,456,587	-		Pf6N2E2_4719	0.38	-0.5
5,456,587	-		Pf6N2E2_4719	0.38	-1.1
5,456,587	-		Pf6N2E2_4719	0.38	-1.1
5,456,587	-		Pf6N2E2_4719	0.38	+0.5
5,456,587	-		Pf6N2E2_4719	0.38	-0.5
5,456,587	-		Pf6N2E2_4719	0.38	-0.5
5,456,587	-		Pf6N2E2_4719	0.38	+0.5
5,456,587	-		Pf6N2E2_4719	0.38	+0.5
5,456,587	-		Pf6N2E2_4719	0.38	-1.2
5,456,658	+		Pf6N2E2_4719	0.60	-1.1
5,456,706	+		Pf6N2E2_4719	0.75	+0.5
5,456,785	+				-1.5
5,456,785	+				-0.5
5,456,785	+				-0.5
5,456,785	+				-0.7
5,456,786	-				+0.5
5,456,786	-				-2.8
5,456,786	-				-0.5
5,456,786	-				+0.5
5,456,867	+				-2.4
5,456,867	+				+0.5
5,456,868	-				-1.1
5,456,945	+				-1.3
5,457,167	+		Pf6N2E2_4720	0.13	-1.2
5,457,168	-		Pf6N2E2_4720	0.13	-1.7
5,457,168	-		Pf6N2E2_4720	0.13	-1.8
5,457,170	+		Pf6N2E2_4720	0.13	-0.6
5,457,171	-		Pf6N2E2_4720	0.13	-0.7
5,457,186	-		Pf6N2E2_4720	0.13	-0.5
5,457,209	+		Pf6N2E2_4720	0.14	-0.5
5,457,210	-		Pf6N2E2_4720	0.14	-0.5
5,457,218	+		Pf6N2E2_4720	0.14	-1.4
5,457,218	+		Pf6N2E2_4720	0.14	+0.5
5,457,219	-		Pf6N2E2_4720	0.14	-0.5
5,457,227	-		Pf6N2E2_4720	0.15	-0.3
5,457,275	+		Pf6N2E2_4720	0.16	+0.5
5,457,275	+		Pf6N2E2_4720	0.16	+0.5
5,457,275	+		Pf6N2E2_4720	0.16	-1.5
5,457,276	-		Pf6N2E2_4720	0.16	+0.5
5,457,276	-		Pf6N2E2_4720	0.16	+0.5
5,457,276	-		Pf6N2E2_4720	0.16	-1.0
5,457,276	-		Pf6N2E2_4720	0.16	-0.5
5,457,276	-		Pf6N2E2_4720	0.16	+0.5
5,457,276	-		Pf6N2E2_4720	0.16	+0.5
5,457,281	+		Pf6N2E2_4720	0.16	-0.8
5,457,281	+		Pf6N2E2_4720	0.16	-1.5
5,457,281	+		Pf6N2E2_4720	0.16	-1.5
5,457,281	+		Pf6N2E2_4720	0.16	-1.5
5,457,281	+		Pf6N2E2_4720	0.16	+0.5
5,457,282	-		Pf6N2E2_4720	0.16	-0.5
5,457,282	-		Pf6N2E2_4720	0.16	+0.5