Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4070

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
4,744,588	+		Pf6N2E2_4069	0.20	-1.8
4,744,619	+		Pf6N2E2_4069	0.24	-1.5
4,744,620	-		Pf6N2E2_4069	0.24	-0.8
4,744,800	-		Pf6N2E2_4069	0.44	-0.5
4,744,800	-		Pf6N2E2_4069	0.44	-0.6
4,744,862	+		Pf6N2E2_4069	0.51	+0.5
4,744,863	-		Pf6N2E2_4069	0.51	-0.5
4,744,899	-		Pf6N2E2_4069	0.55	-0.6
4,744,916	+		Pf6N2E2_4069	0.57	-1.7
4,744,917	-		Pf6N2E2_4069	0.57	+0.5
4,744,917	-		Pf6N2E2_4069	0.57	-0.6
4,744,917	-		Pf6N2E2_4069	0.57	+0.5
4,745,063	+		Pf6N2E2_4069	0.73	-0.5
4,745,063	+		Pf6N2E2_4069	0.73	+0.5
4,745,064	-		Pf6N2E2_4069	0.73	-1.5
4,745,122	+		Pf6N2E2_4069	0.80	-1.1
4,745,122	+		Pf6N2E2_4069	0.80	+0.5
4,745,122	+		Pf6N2E2_4069	0.80	+0.5
4,745,122	+		Pf6N2E2_4069	0.80	-0.4
4,745,123	-		Pf6N2E2_4069	0.80	+0.2
4,745,123	-		Pf6N2E2_4069	0.80	-0.3
4,745,123	-		Pf6N2E2_4069	0.80	-0.8
4,745,123	-		Pf6N2E2_4069	0.80	-0.5
4,745,198	+		Pf6N2E2_4069	0.88	-1.1
4,745,198	+		Pf6N2E2_4069	0.88	-2.1
4,745,198	+		Pf6N2E2_4069	0.88	-2.5
4,745,198	+		Pf6N2E2_4069	0.88	-0.5
4,745,199	-		Pf6N2E2_4069	0.89	+0.5
4,745,199	-		Pf6N2E2_4069	0.89	-0.5
4,745,199	-		Pf6N2E2_4069	0.89	-0.9
4,745,199	-		Pf6N2E2_4069	0.89	-1.1
4,745,199	-		Pf6N2E2_4069	0.89	-1.8
4,745,231	+				+0.5
4,745,231	+				-0.5
4,745,231	+				+0.5
4,745,231	+				-1.1
4,745,231	+				-1.5
4,745,231	+				+0.5
4,745,232	-				-1.1
4,745,232	-				-1.5
4,745,306	-				-1.1
4,745,344	-				+0.5
4,745,365	+				-0.5
4,745,366	-				+0.5
4,745,418	+				-0.5
4,745,418	+				+0.5
4,745,419	-				+0.5
4,745,419	-				+0.5
4,745,419	-				+0.5
4,745,419	-				+0.5
4,745,419	-				+0.5
4,745,486	+				-1.5
4,745,527	+				-0.5
4,745,527	+				-1.5
4,745,587	+				+0.5
4,745,587	+				-1.5
4,745,587	+				-1.2
4,745,587	+				-0.5
4,745,587	+				+0.5
4,745,587	+				-1.2
4,745,684	-		Pf6N2E2_4070	0.17	-1.1
4,745,913	+		Pf6N2E2_4070	0.42	-1.1
4,746,004	-		Pf6N2E2_4070	0.52	-1.8
4,746,077	+		Pf6N2E2_4070	0.60	+0.1
4,746,077	+		Pf6N2E2_4070	0.60	+0.5
4,746,105	+		Pf6N2E2_4070	0.63	+0.5
4,746,105	+		Pf6N2E2_4070	0.63	-1.5
4,746,106	-		Pf6N2E2_4070	0.63	-0.5
4,746,106	-		Pf6N2E2_4070	0.63	-1.5
4,746,373	+				-1.8
4,746,373	+				-1.1
4,746,373	+				-0.5
4,746,373	+				+0.5
4,746,373	+				+0.5
4,746,373	+				-0.4
4,746,373	+				+0.5
4,746,374	-				-0.5
4,746,374	-				+0.5
4,746,374	-				-0.2
4,746,374	-				+0.5
4,746,443	+				+0.5
4,746,443	+				-0.5
4,746,444	-				-0.6
4,746,444	-				-1.1
4,746,444	-				-1.1
4,746,444	-				-0.2
4,746,444	-				+0.5
4,746,455	+				+0.5
4,746,455	+				-0.3
4,746,455	+				+0.5
4,746,455	+				-0.5
4,746,455	+				+0.5
4,746,455	+				-1.5
4,746,455	+				-1.1
4,746,455	+				+0.5
4,746,455	+				-0.5
4,746,456	-				-1.8
4,746,456	-				-0.2
4,746,456	-				-0.5
4,746,456	-				-1.1
4,746,456	-				-1.1
4,746,456	-				+1.2
4,746,456	-				+0.5
4,746,456	-				-0.5
4,746,456	-				+0.5
4,746,456	-				-0.2
4,746,456	-				-1.7
4,746,456	-				+1.3
4,746,456	-				+0.5
4,746,463	+				-0.5
4,746,464	-				-0.5
4,746,491	+				-1.5
4,746,492	-				+0.5
4,746,618	+				+0.5
4,746,618	+				-1.0
4,746,618	+				+0.9
4,746,618	+				-1.8
4,746,618	+				-0.5
4,746,618	+				-0.5
4,746,618	+				-1.5
4,746,618	+				-0.6
4,746,618	+				-0.5
4,746,618	+				+0.5
4,746,618	+				-0.5
4,746,618	+				+0.5
4,746,618	+				-1.1
4,746,619	-				-0.5
4,746,619	-				+0.5
4,746,619	-				-0.5
4,746,619	-				-0.9
4,746,619	-				-2.0
4,746,619	-				-0.0
4,746,619	-				-1.1
4,746,622	+				-0.5
4,746,646	+				+0.5
4,746,646	+				-1.8
4,746,647	-				-0.5
4,746,729	+		Pf6N2E2_4071	0.15	+0.5
4,746,729	+		Pf6N2E2_4071	0.15	+0.5
4,746,729	+		Pf6N2E2_4071	0.15	-0.5
4,746,729	+		Pf6N2E2_4071	0.15	-1.1
4,746,730	-		Pf6N2E2_4071	0.15	+0.5
4,746,730	-		Pf6N2E2_4071	0.15	+0.5
4,746,730	-		Pf6N2E2_4071	0.15	-0.5
4,746,730	-		Pf6N2E2_4071	0.15	-0.5
4,747,412	+				+0.5
4,747,412	+				+0.5
4,747,445	-				-0.2