Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3606

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
4,196,251	-				-1.9
4,196,251	-				+0.5
4,196,323	-				+0.5
4,196,418	+				+0.5
4,196,418	+				-1.9
4,196,419	-				-1.1
4,196,419	-				-0.5
4,196,456	+				+0.5
4,196,456	+				-4.4
4,196,457	-				+0.5
4,196,457	-				-0.3
4,196,457	-				-1.1
4,196,457	-				-0.5
4,196,590	-		Pf6N2E2_3606	0.16	+0.5
4,196,676	+		Pf6N2E2_3606	0.27	-0.5
4,196,676	+		Pf6N2E2_3606	0.27	-1.1
4,196,676	+		Pf6N2E2_3606	0.27	+0.5
4,196,676	+		Pf6N2E2_3606	0.27	+0.5
4,196,676	+		Pf6N2E2_3606	0.27	+1.2
4,196,676	+		Pf6N2E2_3606	0.27	-0.5
4,196,677	-		Pf6N2E2_3606	0.28	-0.5
4,196,677	-		Pf6N2E2_3606	0.28	-0.7
4,196,677	-		Pf6N2E2_3606	0.28	-0.8
4,196,677	-		Pf6N2E2_3606	0.28	+0.5
4,196,677	-		Pf6N2E2_3606	0.28	+0.5
4,196,677	-		Pf6N2E2_3606	0.28	+0.5
4,196,677	-		Pf6N2E2_3606	0.28	+0.5
4,196,677	-		Pf6N2E2_3606	0.28	-0.6
4,196,677	-		Pf6N2E2_3606	0.28	+0.5
4,196,680	+		Pf6N2E2_3606	0.28	-0.5
4,196,680	+		Pf6N2E2_3606	0.28	+0.5
4,196,680	+		Pf6N2E2_3606	0.28	-0.5
4,196,681	-		Pf6N2E2_3606	0.28	+0.5
4,196,681	-		Pf6N2E2_3606	0.28	+0.5
4,196,681	-		Pf6N2E2_3606	0.28	-1.3
4,196,681	-		Pf6N2E2_3606	0.28	+0.2
4,196,681	-		Pf6N2E2_3606	0.28	-0.5
4,196,843	-		Pf6N2E2_3606	0.49	+0.5
4,196,902	+		Pf6N2E2_3606	0.57	+0.5
4,197,005	+		Pf6N2E2_3606	0.71	-0.9
4,197,006	-		Pf6N2E2_3606	0.71	-1.0
4,197,166	+				-0.3
4,197,238	-				-0.8
4,197,238	-				-0.5
4,197,295	-				+0.5
4,197,303	+				+0.5
4,197,303	+				+0.5
4,197,303	+				-0.5
4,197,303	+				+0.5
4,197,303	+				-0.5
4,197,304	-				+0.5
4,197,304	-				-0.5
4,197,304	-				-0.6
4,197,304	-				+0.5
4,197,361	-				-1.3
4,197,538	-		Pf6N2E2_3607	0.12	-1.0
4,197,740	+		Pf6N2E2_3607	0.20	-2.5
4,197,740	+		Pf6N2E2_3607	0.20	+0.5
4,197,741	-		Pf6N2E2_3607	0.20	+0.5
4,197,741	-		Pf6N2E2_3607	0.20	-2.9
4,197,741	-		Pf6N2E2_3607	0.20	-1.7
4,197,741	-		Pf6N2E2_3607	0.20	+0.5
4,197,743	+		Pf6N2E2_3607	0.20	+0.5
4,197,744	-		Pf6N2E2_3607	0.20	+0.5
4,197,744	-		Pf6N2E2_3607	0.20	-0.5
4,197,744	-		Pf6N2E2_3607	0.20	-0.5
4,197,785	+		Pf6N2E2_3607	0.21	+0.5
4,197,785	+		Pf6N2E2_3607	0.21	-0.5
4,197,785	+		Pf6N2E2_3607	0.21	+0.5
4,197,785	+		Pf6N2E2_3607	0.21	+0.5
4,197,786	-		Pf6N2E2_3607	0.21	+0.5
4,197,786	-		Pf6N2E2_3607	0.21	-1.1
4,197,786	-		Pf6N2E2_3607	0.21	-1.7
4,197,980	+		Pf6N2E2_3607	0.29	+0.5
4,197,981	-		Pf6N2E2_3607	0.29	-1.5
4,198,118	+		Pf6N2E2_3607	0.34	+0.5
4,198,119	-		Pf6N2E2_3607	0.34	+0.5
4,198,127	+		Pf6N2E2_3607	0.34	+0.5
4,198,163	+		Pf6N2E2_3607	0.36	-3.3
4,198,164	-		Pf6N2E2_3607	0.36	-0.5