Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
27	+				-0.7
28	-				-0.7
35	-				-1.3
35	-				-0.3
158	-				+0.3
181	+		Pf6N2E2_1	0.12	+0.3
182	-		Pf6N2E2_1	0.12	-0.2
193	+		Pf6N2E2_1	0.13	+0.3
298	+		Pf6N2E2_1	0.27	+0.3
349	+		Pf6N2E2_1	0.34	+0.3
353	-		Pf6N2E2_1	0.34	-0.7
353	-		Pf6N2E2_1	0.34	-1.7
369	+		Pf6N2E2_1	0.36	-0.7
370	-		Pf6N2E2_1	0.36	+0.3
370	-		Pf6N2E2_1	0.36	+0.3
838	+				-0.6
839	-				+0.3
839	-				+0.3
839	-				-0.4
902	+				-1.7
902	+				+0.3
902	+				-0.7
903	-				-0.7
904	+				-0.7
904	+				-0.7
904	+				-1.3
904	+				-0.5
905	-				+0.3
905	-				+0.3
948	-				+0.3
955	+				+0.3
955	+				+0.3
1,037	-				-1.2
1,060	+				+0.3
1,060	+				-1.3
1,060	+				+0.3
1,061	-				+0.3
1,349	-		Pf6N2E2_2	0.47	-1.1
1,430	+		Pf6N2E2_2	0.58	-1.3
1,431	-		Pf6N2E2_2	0.58	-0.7
1,431	-		Pf6N2E2_2	0.58	-1.8
1,431	-		Pf6N2E2_2	0.58	-0.7
1,960	-				-0.7
2,173	+				+0.3
2,227	+				-0.7
2,228	-				+0.3