Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1249

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
1,459,282	+		Pf6N2E2_1247	0.10	-0.9
1,459,282	+		Pf6N2E2_1247	0.10	+0.1
1,459,301	-		Pf6N2E2_1247	0.20	-0.9
1,459,301	-		Pf6N2E2_1247	0.20	+0.1
1,459,362	+		Pf6N2E2_1247	0.53	+0.1
1,459,362	+		Pf6N2E2_1247	0.53	-0.9
1,459,362	+		Pf6N2E2_1247	0.53	+0.1
1,459,362	+		Pf6N2E2_1247	0.53	+1.7
1,459,362	+		Pf6N2E2_1247	0.53	+0.1
1,459,363	-		Pf6N2E2_1247	0.54	+0.1
1,459,547	-				-1.1
1,459,547	-				+0.7
1,459,553	-				-0.0
1,459,593	+				-0.6
1,459,594	-				-0.9
1,459,594	-				+0.1
1,459,632	+				-2.5
1,459,652	+				+0.1
1,459,694	+				+0.1
1,459,694	+				+0.1
1,459,695	-				+0.1
1,459,695	-				-0.9
1,459,696	+				+0.1
1,459,696	+				-0.9
1,459,696	+				+0.1
1,459,697	-				-0.6
1,459,706	+				-0.9
1,459,706	+				+0.7
1,459,859	+		Pf6N2E2_1248	0.34	+0.1
1,459,860	-		Pf6N2E2_1248	0.35	-0.9
1,459,919	+		Pf6N2E2_1248	0.51	-0.9
1,459,919	+		Pf6N2E2_1248	0.51	-0.9
1,459,919	+				+0.1
1,460,094	+				-0.5
1,460,094	+				+0.1
1,460,094	+				-1.9
1,460,094	+				-0.9
1,460,094	+				+0.1
1,460,094	+				+0.1
1,460,124	-				+0.1
1,460,166	-				+0.1
1,460,220	+				-0.9
1,460,221	-				+0.1
1,460,221	-				+0.1
1,460,399	+		Pf6N2E2_1249	0.17	-0.9
1,460,400	-		Pf6N2E2_1249	0.17	+0.1
1,460,432	+		Pf6N2E2_1249	0.21	-0.9
1,460,495	+		Pf6N2E2_1249	0.27	-0.9
1,460,552	+		Pf6N2E2_1249	0.34	-0.9
1,460,552	+		Pf6N2E2_1249	0.34	+0.1
1,460,634	+		Pf6N2E2_1249	0.42	-0.5
1,460,635	-		Pf6N2E2_1249	0.43	+0.1
1,460,963	+		Pf6N2E2_1249	0.78	-0.9
1,461,149	+				+0.1
1,461,149	+				+0.1
1,461,149	+				-0.6
1,461,190	+				-0.5
1,461,279	+				-0.9
1,461,312	-				-1.5
1,461,312	-				+0.1
1,461,519	-				+0.1
1,461,519	-				+0.7
1,461,639	-		Pf6N2E2_1250	0.14	+0.1
1,461,737	+		Pf6N2E2_1250	0.19	-0.2
1,461,740	+		Pf6N2E2_1250	0.19	-0.9
1,461,740	+		Pf6N2E2_1250	0.19	+0.1
1,461,740	+		Pf6N2E2_1250	0.19	+0.5
1,461,741	-		Pf6N2E2_1250	0.19	+1.1
1,461,975	-		Pf6N2E2_1250	0.29	-0.9
1,461,975	-		Pf6N2E2_1250	0.29	+0.1
1,461,975	-		Pf6N2E2_1250	0.29	+0.1
1,461,975	-		Pf6N2E2_1250	0.29	+0.1
1,461,975	-		Pf6N2E2_1250	0.29	+0.1
1,461,975	-		Pf6N2E2_1250	0.29	+0.1
1,462,074	+		Pf6N2E2_1250	0.34	+0.1
1,462,132	+		Pf6N2E2_1250	0.36	+0.1
1,462,133	-		Pf6N2E2_1250	0.36	+0.1
1,462,133	-		Pf6N2E2_1250	0.36	-0.9
1,462,133	-		Pf6N2E2_1250	0.36	+0.1
1,462,133	-		Pf6N2E2_1250	0.36	+0.1
1,462,157	+		Pf6N2E2_1250	0.37	+0.1