Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4340

Experiment: Ying_all64 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 3
5,062,178	+		Pf6N2E2_4339	0.28	-0.3
5,062,178	+		Pf6N2E2_4339	0.28	-0.5
5,062,179	-		Pf6N2E2_4339	0.28	-0.5
5,062,179	-		Pf6N2E2_4339	0.28	+0.5
5,062,179	-		Pf6N2E2_4339	0.28	-0.5
5,062,179	-		Pf6N2E2_4339	0.28	-2.1
5,062,179	-		Pf6N2E2_4339	0.28	-0.6
5,062,179	-		Pf6N2E2_4339	0.28	-1.2
5,062,295	+		Pf6N2E2_4339	0.36	+0.5
5,062,364	+		Pf6N2E2_4339	0.42	+1.5
5,062,364	+		Pf6N2E2_4339	0.42	-0.5
5,062,364	+		Pf6N2E2_4339	0.42	-0.3
5,062,364	+		Pf6N2E2_4339	0.42	-1.1
5,062,364	+		Pf6N2E2_4339	0.42	+0.5
5,062,364	+		Pf6N2E2_4339	0.42	-0.8
5,062,364	+		Pf6N2E2_4339	0.42	-0.5
5,062,365	-		Pf6N2E2_4339	0.42	+0.5
5,062,365	-		Pf6N2E2_4339	0.42	+0.5
5,062,365	-		Pf6N2E2_4339	0.42	+0.5
5,062,365	-		Pf6N2E2_4339	0.42	-1.1
5,062,365	-		Pf6N2E2_4339	0.42	-1.1
5,062,365	-		Pf6N2E2_4339	0.42	-0.5
5,062,365	-		Pf6N2E2_4339	0.42	-0.0
5,062,365	-		Pf6N2E2_4339	0.42	-0.5
5,062,595	+		Pf6N2E2_4339	0.59	-1.9
5,062,595	+		Pf6N2E2_4339	0.59	-0.6
5,062,673	+		Pf6N2E2_4339	0.65	-1.5
5,062,700	+		Pf6N2E2_4339	0.67	+0.5
5,062,700	+		Pf6N2E2_4339	0.67	-0.5
5,062,701	-		Pf6N2E2_4339	0.67	+0.5
5,062,787	+		Pf6N2E2_4339	0.73	+1.5
5,063,003	+		Pf6N2E2_4339	0.89	-0.3
5,063,021	+				-2.4
5,063,021	+				-2.1
5,063,022	-				+0.5
5,063,024	+				+0.5
5,063,024	+				+0.5
5,063,024	+				-1.1
5,063,025	-				-0.3
5,063,025	-				-0.5
5,063,025	-				+0.5
5,063,025	-				-0.8
5,063,025	-				-1.1
5,063,167	+				+0.5
5,063,648	+		Pf6N2E2_4340	0.38	+0.5
5,063,648	+		Pf6N2E2_4340	0.38	-0.5
5,063,648	+		Pf6N2E2_4340	0.38	+0.5
5,063,648	+		Pf6N2E2_4340	0.38	-0.5
5,063,648	+		Pf6N2E2_4340	0.38	+0.5
5,063,649	-		Pf6N2E2_4340	0.38	-2.3
5,063,667	-		Pf6N2E2_4340	0.39	+0.5
5,063,783	+		Pf6N2E2_4340	0.48	-0.5
5,063,784	-		Pf6N2E2_4340	0.48	-0.5
5,064,438	+				-0.5
5,064,439	-				-0.8
5,064,439	-				-0.7
5,064,477	+				-1.5
5,064,477	+				+0.5
5,064,477	+				-0.8
5,064,478	-				-0.5
5,064,478	-				-0.5
5,064,478	-				+0.5
5,064,596	+				-0.5
5,064,596	+				-1.1
5,064,596	+				-0.5
5,064,597	-				-0.5
5,064,597	-				+0.5
5,064,811	+		Pf6N2E2_4341	0.10	+0.5
5,064,811	+		Pf6N2E2_4341	0.10	-0.4
5,064,811	+		Pf6N2E2_4341	0.10	+0.5
5,064,812	-		Pf6N2E2_4341	0.10	-1.8
5,064,826	+		Pf6N2E2_4341	0.11	+1.1
5,064,826	+		Pf6N2E2_4341	0.11	-0.8
5,065,000	+		Pf6N2E2_4341	0.16	-1.1
5,065,001	-		Pf6N2E2_4341	0.16	-0.5
5,065,001	-		Pf6N2E2_4341	0.16	+0.5
5,065,001	-		Pf6N2E2_4341	0.16	+0.5
5,065,006	-		Pf6N2E2_4341	0.16	-0.5
5,065,195	+		Pf6N2E2_4341	0.21	-0.1
5,065,195	+		Pf6N2E2_4341	0.21	-1.5
5,065,196	-		Pf6N2E2_4341	0.21	-2.0
5,065,225	+		Pf6N2E2_4341	0.22	+0.5
5,065,225	+		Pf6N2E2_4341	0.22	+0.5
5,065,226	-		Pf6N2E2_4341	0.22	+0.5
5,065,270	+		Pf6N2E2_4341	0.23	-0.5
5,065,270	+		Pf6N2E2_4341	0.23	-0.3
5,065,270	+		Pf6N2E2_4341	0.23	+0.5
5,065,270	+		Pf6N2E2_4341	0.23	-0.2
5,065,271	-		Pf6N2E2_4341	0.23	+0.5
5,065,271	-		Pf6N2E2_4341	0.23	+0.5