Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4329

Experiment: Ying_all64 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 3
5,051,169	+				-1.1
5,051,170	-				-0.5
5,051,170	-				-0.5
5,051,172	+				-0.5
5,051,172	+				+1.2
5,051,172	+				-0.5
5,051,172	+				+0.5
5,051,172	+				-0.2
5,051,172	+				-2.1
5,051,172	+				-0.5
5,051,173	-				-0.5
5,051,173	-				-1.8
5,051,173	-				+1.5
5,051,173	-				-1.1
5,051,173	-				+0.5
5,051,173	-				+0.5
5,051,308	+		Pf6N2E2_4328	0.20	+0.2
5,051,308	+		Pf6N2E2_4328	0.20	-1.8
5,051,309	-		Pf6N2E2_4328	0.21	-1.5
5,051,309	-		Pf6N2E2_4328	0.21	-1.1
5,051,368	+		Pf6N2E2_4328	0.26	+0.5
5,051,368	+		Pf6N2E2_4328	0.26	+0.5
5,051,369	-		Pf6N2E2_4328	0.27	+0.5
5,051,369	-		Pf6N2E2_4328	0.27	+0.5
5,051,369	-		Pf6N2E2_4328	0.27	-0.4
5,051,369	-		Pf6N2E2_4328	0.27	-0.5
5,051,515	+		Pf6N2E2_4328	0.41	+0.5
5,051,515	+		Pf6N2E2_4328	0.41	-1.1
5,051,516	-		Pf6N2E2_4328	0.41	-0.7
5,051,516	-		Pf6N2E2_4328	0.41	+0.5
5,051,545	+		Pf6N2E2_4328	0.44	+0.5
5,051,545	+		Pf6N2E2_4328	0.44	+0.5
5,051,546	-		Pf6N2E2_4328	0.44	-0.4
5,051,608	+		Pf6N2E2_4328	0.50	+0.5
5,051,608	+		Pf6N2E2_4328	0.50	-1.1
5,051,608	+		Pf6N2E2_4328	0.50	-1.1
5,051,608	+		Pf6N2E2_4328	0.50	-1.5
5,051,609	-		Pf6N2E2_4328	0.50	+0.5
5,051,609	-		Pf6N2E2_4328	0.50	-1.1
5,051,698	+		Pf6N2E2_4328	0.59	-1.1
5,051,698	+		Pf6N2E2_4328	0.59	-1.1
5,051,698	+		Pf6N2E2_4328	0.59	-0.9
5,051,699	-		Pf6N2E2_4328	0.59	+0.5
5,051,755	+		Pf6N2E2_4328	0.65	+0.3
5,051,842	+		Pf6N2E2_4328	0.74	-0.5
5,051,842	+		Pf6N2E2_4328	0.74	-1.1
5,051,843	-		Pf6N2E2_4328	0.74	+0.5
5,052,082	+				+0.5
5,052,083	-				+0.5
5,052,117	-				-1.5
5,052,181	+				-0.5
5,052,199	+				+0.0
5,052,220	-				+0.5
5,052,220	-				+0.5
5,052,220	-				-1.0
5,052,426	+		Pf6N2E2_4329	0.17	-0.6
5,052,427	-		Pf6N2E2_4329	0.17	+0.5
5,052,486	+		Pf6N2E2_4329	0.20	-0.5
5,052,486	+		Pf6N2E2_4329	0.20	-0.3
5,052,486	+		Pf6N2E2_4329	0.20	+0.5
5,052,486	+		Pf6N2E2_4329	0.20	-0.5
5,052,487	-		Pf6N2E2_4329	0.20	-1.1
5,052,487	-		Pf6N2E2_4329	0.20	-0.5
5,052,487	-		Pf6N2E2_4329	0.20	+0.5
5,052,753	+		Pf6N2E2_4329	0.34	-0.5
5,052,753	+		Pf6N2E2_4329	0.34	-1.1
5,052,754	-		Pf6N2E2_4329	0.34	+0.5
5,052,754	-		Pf6N2E2_4329	0.34	-1.5
5,052,754	-		Pf6N2E2_4329	0.34	-1.1
5,052,754	-		Pf6N2E2_4329	0.34	-0.5
5,052,819	+		Pf6N2E2_4329	0.38	-0.5
5,052,820	-		Pf6N2E2_4329	0.38	-0.5
5,052,820	-		Pf6N2E2_4329	0.38	-1.1
5,052,820	-		Pf6N2E2_4329	0.38	-0.6
5,052,820	-		Pf6N2E2_4329	0.38	-2.3
5,052,820	-		Pf6N2E2_4329	0.38	-1.1
5,052,823	-		Pf6N2E2_4329	0.38	-0.5
5,052,864	+		Pf6N2E2_4329	0.40	+0.5
5,052,864	+		Pf6N2E2_4329	0.40	-0.5
5,052,865	-		Pf6N2E2_4329	0.40	+0.5
5,052,865	-		Pf6N2E2_4329	0.40	+0.5
5,052,865	-		Pf6N2E2_4329	0.40	-0.5
5,053,197	+		Pf6N2E2_4329	0.58	+0.5
5,053,197	+		Pf6N2E2_4329	0.58	-0.7
5,053,198	-		Pf6N2E2_4329	0.58	-0.1
5,053,198	-		Pf6N2E2_4329	0.58	-2.5
5,053,536	+		Pf6N2E2_4329	0.76	-0.5
5,053,731	+		Pf6N2E2_4329	0.87	+0.5
5,053,732	-		Pf6N2E2_4329	0.87	-0.5
5,053,846	-				-1.8
5,053,953	+				-0.5
5,053,953	+				+0.5
5,053,953	+				+0.5
5,053,954	-				-1.1
5,053,954	-				+0.5
5,054,503	+				+0.5
5,054,586	+		Pf6N2E2_4331	0.23	-0.3
5,054,587	-		Pf6N2E2_4331	0.24	+0.5
5,054,657	+		Pf6N2E2_4331	0.39	-0.4
5,054,657	+		Pf6N2E2_4331	0.39	+0.5
5,054,657	+		Pf6N2E2_4331	0.39	-0.5
5,054,658	-		Pf6N2E2_4331	0.39	+0.5
5,054,907	+				-2.3
5,054,907	+				-0.6
5,054,908	-				+0.5
5,054,908	-				-0.5
5,054,908	-				+0.5
5,054,930	+				-0.5
5,054,930	+				-0.7
5,054,930	+				-0.1
5,054,931	-				-0.5
5,054,931	-				-1.8
5,054,931	-				-1.3