Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_985

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
1,152,917	+				+0.2
1,152,917	+				-1.4
1,152,917	+				+0.2
1,152,917	+				+0.2
1,152,917	+				+0.2
1,152,917	+				-2.6
1,152,918	-				-0.8
1,152,966	+				+0.2
1,152,966	+				+0.2
1,152,995	+				-0.6
1,153,008	-				+0.2
1,153,130	+				+0.2
1,153,162	+				+0.2
1,153,162	+				-0.8
1,153,162	+				+0.2
1,153,191	-				+0.2
1,153,261	+		Pf6N2E2_984	0.12	+0.2
1,153,262	-		Pf6N2E2_984	0.13	-0.8
1,153,379	+		Pf6N2E2_984	0.44	-0.8
1,153,380	-		Pf6N2E2_984	0.44	-0.8
1,153,398	+		Pf6N2E2_984	0.49	+0.2
1,153,398	+		Pf6N2E2_984	0.49	-1.8
1,153,399	-		Pf6N2E2_984	0.49	-0.7
1,153,528	-		Pf6N2E2_984	0.83	-0.8
1,153,528	-		Pf6N2E2_984	0.83	+0.2
1,153,528	-		Pf6N2E2_984	0.83	+0.0
1,153,528	-		Pf6N2E2_984	0.83	+0.2
1,153,528	-		Pf6N2E2_984	0.83	+0.2
1,153,528	-		Pf6N2E2_984	0.83	-0.8
1,153,533	+		Pf6N2E2_984	0.84	-0.8
1,153,533	+		Pf6N2E2_984	0.84	-0.8
1,153,534	-		Pf6N2E2_984	0.85	-0.6
1,153,534	-		Pf6N2E2_984	0.85	-0.8
1,153,633	-				+0.2
1,153,633	-				-0.5
1,153,633	-				-0.8
1,153,786	+				-0.3
1,153,786	+				+0.2
1,153,786	+				-0.5
1,153,788	+				+0.2
1,153,789	-				+0.2
1,153,789	-				+0.2
1,153,789	-				+0.2
1,153,933	+		Pf6N2E2_985	0.11	+0.2
1,153,933	+		Pf6N2E2_985	0.11	+0.2
1,153,934	-		Pf6N2E2_985	0.11	-1.4
1,153,934	-		Pf6N2E2_985	0.11	-0.4
1,153,934	-		Pf6N2E2_985	0.11	+0.2
1,153,990	-		Pf6N2E2_985	0.16	+0.2
1,153,990	-		Pf6N2E2_985	0.16	+1.2
1,153,990	-		Pf6N2E2_985	0.16	-1.4
1,153,990	-		Pf6N2E2_985	0.16	+0.2
1,153,992	+		Pf6N2E2_985	0.16	+0.2
1,154,017	-		Pf6N2E2_985	0.18	+0.2
1,154,017	-		Pf6N2E2_985	0.18	+0.2
1,154,018	+		Pf6N2E2_985	0.18	-1.4
1,154,018	+		Pf6N2E2_985	0.18	+0.2
1,154,019	-		Pf6N2E2_985	0.18	-0.4
1,154,019	-		Pf6N2E2_985	0.18	-2.1
1,154,019	-		Pf6N2E2_985	0.18	+0.2
1,154,022	+		Pf6N2E2_985	0.19	-0.8
1,154,023	-		Pf6N2E2_985	0.19	+0.2
1,154,023	-		Pf6N2E2_985	0.19	-0.8
1,154,023	-		Pf6N2E2_985	0.19	+0.2
1,154,023	-		Pf6N2E2_985	0.19	-1.8
1,154,023	-		Pf6N2E2_985	0.19	+0.2
1,154,023	-		Pf6N2E2_985	0.19	+0.2
1,154,023	-		Pf6N2E2_985	0.19	+0.2
1,154,100	-		Pf6N2E2_985	0.26	+0.2
1,154,108	-		Pf6N2E2_985	0.26	+0.2
1,154,108	-		Pf6N2E2_985	0.26	+0.2
1,154,108	-		Pf6N2E2_985	0.26	+0.2
1,154,108	-		Pf6N2E2_985	0.26	-0.8
1,154,214	+		Pf6N2E2_985	0.36	-0.8
1,154,272	-		Pf6N2E2_985	0.41	+0.2
1,154,337	-		Pf6N2E2_985	0.46	-0.8
1,154,339	-		Pf6N2E2_985	0.47	-0.3
1,154,339	-		Pf6N2E2_985	0.47	+0.2
1,154,348	+		Pf6N2E2_985	0.47	+0.2
1,154,348	+		Pf6N2E2_985	0.47	-1.1
1,154,348	+		Pf6N2E2_985	0.47	+0.2
1,154,349	-		Pf6N2E2_985	0.47	+0.2
1,154,416	+		Pf6N2E2_985	0.53	-0.8
1,154,416	+		Pf6N2E2_985	0.53	-0.5
1,154,511	+		Pf6N2E2_985	0.62	-2.0
1,154,512	-		Pf6N2E2_985	0.62	-0.8
1,154,527	+		Pf6N2E2_985	0.63	+0.2
1,154,527	+		Pf6N2E2_985	0.63	+0.2
1,154,527	+		Pf6N2E2_985	0.63	-1.4
1,154,528	-		Pf6N2E2_985	0.63	-1.8
1,154,544	-		Pf6N2E2_985	0.65	-1.4
1,154,673	+		Pf6N2E2_985	0.76	+0.2
1,154,706	+		Pf6N2E2_985	0.79	-1.1
1,154,707	-		Pf6N2E2_985	0.79	+0.2
1,154,865	-				+0.2
1,155,037	+				+0.2
1,155,038	-				+0.2
1,155,050	+				-3.4
1,155,122	+				+1.2
1,155,122	+				+0.2
1,155,122	+				+0.2
1,155,123	-				-1.4
1,155,141	+				+0.2
1,155,172	+				-0.4
1,155,173	-				+0.2
1,155,299	+		Pf6N2E2_986	0.31	-1.1
1,155,493	+		Pf6N2E2_987	0.48	+0.2
1,155,500	+		Pf6N2E2_987	0.51	+0.2
1,155,500	+		Pf6N2E2_987	0.51	-1.4
1,155,541	-		Pf6N2E2_987	0.68	+0.2
1,155,541	-		Pf6N2E2_987	0.68	+0.2
1,155,603	+				-2.9
1,155,604	-				+0.2
1,155,803	+				-0.7
1,155,865	+				-0.4
1,155,865	+				-1.1
1,155,865	+				-0.4
1,155,865	+				-1.4
1,155,866	-				-1.4
1,155,866	-				-0.8
1,155,866	-				+0.2