Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_650

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
738,077	+		Pf6N2E2_649	0.35	-0.8
738,113	-		Pf6N2E2_649	0.38	+0.2
738,413	+		Pf6N2E2_649	0.64	-0.8
738,834	-				-0.8
738,834	-				+0.2
739,008	+		Pf6N2E2_650	0.28	-0.8
739,152	+		Pf6N2E2_650	0.55	+0.2
739,152	+		Pf6N2E2_650	0.55	-0.8
739,153	-		Pf6N2E2_650	0.55	+0.2
739,153	-		Pf6N2E2_650	0.55	-0.8
739,153	-		Pf6N2E2_650	0.55	-0.8
739,156	+		Pf6N2E2_650	0.55	-1.1
739,157	-		Pf6N2E2_650	0.56	-0.8
739,597	+				-0.3
739,946	+		Pf6N2E2_651	0.23	+0.2
739,947	-		Pf6N2E2_651	0.23	+0.2
740,004	-		Pf6N2E2_651	0.26	-0.9
740,354	+		Pf6N2E2_651	0.40	+0.2
740,354	+		Pf6N2E2_651	0.40	-0.8
740,354	+		Pf6N2E2_651	0.40	-1.4