Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_64

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
103,748	+		Pf6N2E2_63	0.52	+0.3
103,749	-		Pf6N2E2_63	0.52	-0.7
103,749	-		Pf6N2E2_63	0.52	-1.2
103,997	+		Pf6N2E2_63	0.70	+0.3
103,998	-		Pf6N2E2_63	0.70	+0.3
104,318	-				-0.7
104,350	+				-0.7
104,602	+		Pf6N2E2_64	0.25	-0.7
104,603	-		Pf6N2E2_64	0.25	+0.3
104,660	-		Pf6N2E2_64	0.34	-2.4
104,774	-		Pf6N2E2_64	0.52	-1.7
105,092	+				-0.2
105,251	+				-0.9
105,252	-				-0.9
105,252	-				-0.2
105,283	+				+0.3
105,329	+		Pf6N2E2_65	0.14	-0.9
105,330	-		Pf6N2E2_65	0.14	+0.3
105,330	-		Pf6N2E2_65	0.14	-0.7
105,330	-		Pf6N2E2_65	0.14	-0.5
105,330	-		Pf6N2E2_65	0.14	-0.7
105,330	-		Pf6N2E2_65	0.14	-0.7
105,436	+		Pf6N2E2_65	0.28	-0.7
105,436	+		Pf6N2E2_65	0.28	-0.3
105,437	-		Pf6N2E2_65	0.28	-1.2
105,697	+		Pf6N2E2_65	0.62	+0.3
105,698	-		Pf6N2E2_65	0.62	+0.3
105,698	-		Pf6N2E2_65	0.62	+0.3
105,801	+		Pf6N2E2_65	0.76	-0.4
105,802	-		Pf6N2E2_65	0.76	-0.7
105,802	-		Pf6N2E2_65	0.76	+0.3
105,829	+		Pf6N2E2_65	0.79	+0.3
105,829	+		Pf6N2E2_65	0.79	-0.1
105,855	+		Pf6N2E2_65	0.83	-1.9
105,954	+				+0.3
105,955	-				+0.3
106,013	-				+0.3
106,013	-				+0.3