Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_6044

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
6,862,577	+				+0.4
6,862,644	+				+0.4
6,862,645	-				+0.4
6,862,785	+				+0.4
6,863,062	+				+0.0
6,863,063	-				+0.4
6,863,063	-				+0.4
6,863,063	-				-1.3
6,863,063	-				+0.4
6,863,066	+				+0.4
6,863,066	+				-1.2
6,863,067	-				-0.6
6,863,067	-				-1.2
6,863,136	+				-1.2
6,863,137	-				-1.2
6,863,195	-				-1.2
6,863,199	-				-0.6
6,863,232	+				+0.4
6,863,232	+				+0.4
6,863,233	-				-0.6
6,863,233	-				+0.4
6,863,239	+				+0.4
6,863,240	-				-0.6
6,863,240	-				-0.6
6,863,240	-				+0.4
6,863,240	-				+0.4
6,863,240	-				+0.4
6,863,249	+				+0.4
6,863,262	+				-0.6
6,863,263	-				+0.4
6,863,289	+				+0.4
6,863,289	+				+0.4
6,863,303	-				+0.4
6,863,307	+				+0.4
6,863,308	-				+0.4
6,863,390	+				+0.4
6,863,413	+				-2.0
6,863,413	+				+0.9
6,863,413	+				-1.6
6,863,414	-				+0.4
6,863,643	+				+0.4
6,863,643	+				-0.1
6,863,643	+				-1.2
6,863,644	-				+0.4
6,863,644	-				+0.4
6,863,644	-				-0.6
6,863,777	+		Pf6N2E2_6044	0.10	+0.4
6,863,778	-		Pf6N2E2_6044	0.10	+0.4
6,863,779	+		Pf6N2E2_6044	0.10	-0.6
6,863,829	+		Pf6N2E2_6044	0.13	-0.6
6,863,829	+		Pf6N2E2_6044	0.13	+0.4
6,863,829	+		Pf6N2E2_6044	0.13	+0.4
6,863,829	+		Pf6N2E2_6044	0.13	+0.7
6,863,829	+		Pf6N2E2_6044	0.13	+0.4
6,863,830	-		Pf6N2E2_6044	0.13	+0.4
6,863,830	-		Pf6N2E2_6044	0.13	+0.4
6,863,845	-		Pf6N2E2_6044	0.14	-1.2
6,863,845	-		Pf6N2E2_6044	0.14	-0.4
6,864,048	+		Pf6N2E2_6044	0.23	+0.4
6,864,120	-		Pf6N2E2_6044	0.27	-1.2
6,864,167	+		Pf6N2E2_6044	0.29	+0.4
6,864,167	+		Pf6N2E2_6044	0.29	+0.4
6,864,167	+		Pf6N2E2_6044	0.29	+0.4
6,864,168	-		Pf6N2E2_6044	0.29	+0.4
6,864,324	-		Pf6N2E2_6044	0.36	-0.7
6,864,660	+		Pf6N2E2_6044	0.53	+0.4
6,864,660	+		Pf6N2E2_6044	0.53	+0.4
6,864,660	+		Pf6N2E2_6044	0.53	-0.6
6,864,660	+		Pf6N2E2_6044	0.53	-0.6
6,864,660	+		Pf6N2E2_6044	0.53	-0.6
6,864,661	-		Pf6N2E2_6044	0.53	+0.4
6,864,661	-		Pf6N2E2_6044	0.53	+0.4
6,864,661	-		Pf6N2E2_6044	0.53	-1.2
6,864,661	-		Pf6N2E2_6044	0.53	-0.6
6,864,661	-		Pf6N2E2_6044	0.53	-0.4
6,864,661	-		Pf6N2E2_6044	0.53	-1.8
6,864,661	-		Pf6N2E2_6044	0.53	+0.4
6,864,661	-		Pf6N2E2_6044	0.53	+0.4
6,864,661	-		Pf6N2E2_6044	0.53	+0.4
6,864,663	-		Pf6N2E2_6044	0.53	+0.4
6,864,663	-		Pf6N2E2_6044	0.53	-0.6
6,864,663	-		Pf6N2E2_6044	0.53	+0.4
6,864,663	-		Pf6N2E2_6044	0.53	+0.4
6,864,855	+		Pf6N2E2_6044	0.62	+0.4
6,864,855	+		Pf6N2E2_6044	0.62	-0.5
6,864,856	-		Pf6N2E2_6044	0.62	-0.6
6,864,902	-		Pf6N2E2_6044	0.64	-0.6
6,864,902	-		Pf6N2E2_6044	0.64	-0.6
6,864,902	-		Pf6N2E2_6044	0.64	-0.3
6,865,212	+		Pf6N2E2_6044	0.79	+0.4
6,865,213	-		Pf6N2E2_6044	0.79	-1.5
6,865,213	-		Pf6N2E2_6044	0.79	-0.6
6,865,453	+				+0.4
6,865,453	+				-2.5
6,865,453	+				+0.4
6,865,453	+				+0.4
6,865,453	+				+0.4
6,865,453	+				+0.4
6,865,453	+				+0.4
6,865,454	-				+0.4
6,865,625	-				-0.6
6,865,636	+				+0.4
6,865,821	+				+0.4
6,865,884	+		Pf6N2E2_6045	0.40	-0.8
6,866,119	-				-1.2
6,866,119	-				-0.6
6,866,127	-				-0.5
6,866,181	+				+0.4
6,866,181	+				+0.4
6,866,181	+				+0.4
6,866,181	+				+0.4
6,866,181	+				+0.4
6,866,182	-				-0.4
6,866,182	-				-0.2
6,866,182	-				-0.7
6,866,185	+				-0.6
6,866,185	+				-0.6
6,866,185	+				-0.8
6,866,185	+				-0.8
6,866,185	+				+0.4
6,866,185	+				-1.2
6,866,186	-				-0.6
6,866,186	-				+0.4
6,866,186	-				+0.4
6,866,186	-				+0.4
6,866,186	-				+0.4
6,866,186	-				+0.4
6,866,186	-				-0.6
6,866,186	-				+0.4
6,866,213	+				-0.6
6,866,213	+				-1.1
6,866,214	-				-0.3
6,866,254	-				+0.4
6,866,306	+				-0.6
6,866,364	+				-0.3
6,866,365	-				+0.4
6,866,365	-				-0.7
6,866,393	+				-2.8
6,866,405	+				-0.3
6,866,405	+				-0.6
6,866,406	-				+0.4
6,866,406	-				-0.8
6,866,406	-				+0.9
6,866,406	-				+0.9
6,866,406	-				+0.4
6,866,471	+		Pf6N2E2_6046	0.25	+0.4
6,866,471	+		Pf6N2E2_6046	0.25	-0.5
6,866,471	+		Pf6N2E2_6046	0.25	+0.4
6,866,472	-		Pf6N2E2_6046	0.25	+0.4
6,866,472	-		Pf6N2E2_6046	0.25	-0.5
6,866,472	-		Pf6N2E2_6046	0.25	-0.1