Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5964

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
6,782,443	+				+0.4
6,782,612	+		Pf6N2E2_5963	0.27	-0.6
6,782,612	+		Pf6N2E2_5963	0.27	-0.6
6,782,612	+		Pf6N2E2_5963	0.27	-1.2
6,782,612	+		Pf6N2E2_5963	0.27	-1.2
6,782,612	+		Pf6N2E2_5963	0.27	+0.2
6,782,613	-		Pf6N2E2_5963	0.27	-0.6
6,782,613	-		Pf6N2E2_5963	0.27	+0.4
6,782,613	-		Pf6N2E2_5963	0.27	-2.7
6,782,652	-		Pf6N2E2_5963	0.34	+0.4
6,782,784	-		Pf6N2E2_5963	0.56	+0.1
6,782,922	-		Pf6N2E2_5963	0.78	-0.6
6,782,922	-		Pf6N2E2_5963	0.78	-1.2
6,782,922	-		Pf6N2E2_5963	0.78	+0.4
6,782,932	+		Pf6N2E2_5963	0.80	+0.4
6,782,932	+		Pf6N2E2_5963	0.80	-0.6
6,782,932	+		Pf6N2E2_5963	0.80	-0.1
6,782,933	-		Pf6N2E2_5963	0.80	+0.4
6,782,933	-		Pf6N2E2_5963	0.80	-0.9
6,782,961	+		Pf6N2E2_5963	0.85	+0.4
6,783,017	+				-0.9
6,783,018	-				-0.6
6,783,018	-				-0.6
6,783,018	-				+0.5
6,783,018	-				-0.2
6,783,018	-				-0.6
6,783,050	+				+0.4
6,783,050	+				-0.6
6,783,054	+				+0.4
6,783,054	+				-1.2
6,783,201	+		Pf6N2E2_5964	0.24	+0.4
6,783,204	+		Pf6N2E2_5964	0.24	-0.6
6,783,205	-		Pf6N2E2_5964	0.24	-2.6
6,783,205	-		Pf6N2E2_5964	0.24	+0.4
6,783,213	-		Pf6N2E2_5964	0.26	-0.6
6,783,213	-		Pf6N2E2_5964	0.26	+0.4
6,783,279	+		Pf6N2E2_5964	0.37	+0.4
6,783,279	+		Pf6N2E2_5964	0.37	-1.2
6,783,280	-		Pf6N2E2_5964	0.38	-1.2
6,783,280	-		Pf6N2E2_5964	0.38	-0.6
6,783,280	-		Pf6N2E2_5964	0.38	+0.4
6,783,280	-		Pf6N2E2_5964	0.38	+0.4
6,783,477	+		Pf6N2E2_5964	0.73	-1.2
6,783,477	+		Pf6N2E2_5964	0.73	+0.4
6,783,528	+		Pf6N2E2_5964	0.82	-0.6
6,783,528	+		Pf6N2E2_5964	0.82	-1.6
6,783,613	+				-0.1
6,783,767	+				+0.4
6,783,767	+				-2.0
6,783,768	-				-1.6
6,783,769	+				+0.4
6,783,769	+				-0.4
6,783,770	-				+0.4
6,783,770	-				-1.2
6,783,770	-				+0.4
6,784,177	-		Pf6N2E2_5965	0.52	-1.4
6,784,216	-		Pf6N2E2_5965	0.57	-0.6
6,784,266	-		Pf6N2E2_5965	0.63	-0.6
6,784,266	-		Pf6N2E2_5965	0.63	-1.1
6,784,473	+				-0.6
6,784,473	+				-0.6
6,784,474	-				+0.4
6,784,478	+				-2.2
6,784,479	-				+0.4
6,784,517	-				-0.6
6,784,613	+				+0.4
6,784,614	-				+0.4